DRSC/TRiP Functional Genomics Resources

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Protein Alignment Etl1 and Chd6

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_775544.2 Gene:Chd6 / 71389 MGIID:1918639 Length:2711 Species:Mus musculus


Alignment Length:932 Identity:265/932 - (28%)
Similarity:401/932 - (43%) Gaps:205/932 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PSRTERVPGKKRIQVMADSDSDGNDSQTPKKTKLELTVKEKEERYM--AAAKISPHFDTMAIQES 103
            |...|...|.|..:.......:..:.:.|::.|.....||.:|...  ...|...|.:....:|.
Mouse   101 PGEQEGTKGSKDREPKPKRKREPKEPKEPRRAKEPKRAKEPKETKQKDGVKKPRKHREASGTKEG 165

  Fly   104 LSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSNGISGGNFSDNDHSDDDDVKQSKDQVYD 168
            ..:.:.....|....::..:.:|.. |:.:.|...|.|..:..:. :.|||..:...||.::..:
Mouse   166 KEKRSCTDYGSRTKSKKASREQGPT-PVERKKKGKRKNETTVESL-ELDHSLPNPSLQSPEEPSE 228

  Fly   169 SDDSDSEMSTKMTGQRK-------KVFQFMNE-----------------------------ASLI 197
            |.||....|.:...:||       ||.....|                             |::|
Mouse   229 SADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANII 293

  Fly   198 E-LQSVKTLSE--------KKALAIIDVRPFS----DWSDLR---------QKLESIR------- 233
            | :.:.||:.|        ...|..:..|.||    .|:.:.         ||::..|       
Mouse   294 EKILASKTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMK 358

  Fly   234 -----MSGDLLN-------------YAQELINKQNTVAAILSKCN-------------------- 260
                 ...||.|             :.::....:.....::..|:                    
Mouse   359 HIFTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVK 423

  Fly   261 --------NMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMG 317
                    ..|..:|:..|:....:|..:...:..:|.:||:.|:|||........|.|||||||
Mouse   424 EFESLQILPEVKHVERPASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYNRKNCILADEMG 488

  Fly   318 LGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERR----- 377
            ||||||.||||:.:...|: ....||:.|.||:.|||.|...| .|:....|||||..|:     
Mouse   489 LGKTIQSIAFLSEIFVRGI-HGPFLIIAPLSTITNWEREFRTW-TEMNAIVYHGSQISRQMIQQY 551

  Fly   378 RMRGRFAK----DGFTGFDVLLTTYH-IVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYAN 437
            .|..|.|:    .|...|.|::||:. |:...||.:|:...|    ||.||||.|||...:....
Mouse   552 EMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSC----VIIDEAHRLKNRNCKLLEG 612

  Fly   438 LITINARMRILLTGTPLQNNLLELISLLCFVMPK------FFAKSIEDIKSLFAKKGKSDGDQDE 496
            |..:....::|||||||||::.||.|||.|:.|.      .|.:...|:|:              
Mouse   613 LKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKT-------------- 663

  Fly   497 VSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGE 561
                 |.|:::.:.|:||.:|||||.||.|||..|...:.:|.:::.||.||..:::   .|...
Mouse   664 -----EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILE---KNFSF 720

  Fly   562 VCSSSERAG----IAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELA 622
            :...:.:..    |..|||:|:..|||.|         :.|..:::  ...|:|.:.       :
Mouse   721 LTKGANQHNMPNLINTMMELRKCCNHPYL---------INGAEEKI--LEDFRKAHS-------S 767

  Fly   623 VMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEY 687
            ..||||:..|:..               :||.:.:|.|||||.|.||:||:|||....|||:|:|
Mouse   768 EASDFQLQAMIQA---------------AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDY 817

  Fly   688 LRIRKFGFCRLDGATAVNVRQDLITDF-NGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNP 751
            |..|::.:.|:||....|:||..|..| ..|...|||||.|:|||:||||||||||:|.|.|:||
Mouse   818 LIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 882

  Fly   752 YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITS--NEKGEVHEQRCVV 814
            .||.||:.||||:||.:.|.:||||:.::.|..:...|..||.|:|.|..  |.||..:..:.:.
Mouse   883 QNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLS 947

  Fly   815 K------LLTTALGLDKDQEEQ 830
            |      |...|.|...|:|::
Mouse   948 KMEVEDLLRKGAYGALMDEEDE 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 14/91 (15%)
HepA <276..795 CDD:440319 200/539 (37%)
Chd6NP_775544.2 Required for DNA-dependent ATPase activity. /evidence=ECO:0000250 1..746 166/674 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..243 27/143 (19%)
PTZ00449 <101..372 CDD:185628 49/272 (18%)
CD1_tandem_CHD5-9_like 287..352 CDD:349315 13/64 (20%)
CD2_tandem_CHD5-9_like 371..429 CDD:349310 1/57 (2%)
PLN03142 459..>984 CDD:215601 211/572 (37%)
DEAD-like_helicase_N 460..681 CDD:475120 91/245 (37%)
DEAH box 597..600 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1318..1389
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1951..1978
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1997..2059
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2124..2147
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2321..2350
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2373..2419
BRK 2402..2435 CDD:470653
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2550..2602
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2641..2711
Blue background indicates that the domain is not in the aligned region.

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