DRSC/TRiP Functional Genomics Resources

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Protein Alignment Etl1 and smarcal1

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_073768103.1 Gene:smarcal1 / 560412 ZFINID:ZDB-GENE-041210-303 Length:810 Species:Danio rerio


Alignment Length:902 Identity:204/902 - (22%)
Similarity:324/902 - (35%) Gaps:266/902 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVAASASASASSSAKSSLSDLRQFRINKNASSVVASPSRTE---RVPGKKRIQVMADSDSDGNDS 66
            |.|::||:....:.|.|..:.|             .|...|   .:|.||               
Zfish    93 TAASTASSFYGQAGKPSTGEKR-------------PPKPLEPAAHIPAKK--------------- 129

  Fly    67 QTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASV--------RYLRENCK 123
              |..:.....|...|.|:  ..::..|.|.:.:.:|:...|:|.|..:        :.|.|.. 
Zfish   130 --PAVSLRGRCVSHSENRF--RVEVGYHADLILVFKSIPSKNYDPATKMWNFSLEDYQMLMEQV- 189

  Fly   124 PKGHNGPLAKSKLKPRSNGISGGNFSDNDHSDDDD--------------------------VKQS 162
              .|   |....||| ..|:.|.|.|.:.....|.                          |.:|
Zfish   190 --AH---LPSISLKP-LEGMEGLNISASTCRPKDAAAMPALMRLCQGWQKPGATIKGKCVLVSRS 248

  Fly   163 KDQV---YDSD--DSDSEMSTKMTGQRKKVFQFMNE------ASLIELQSVKTLSEKKALAIIDV 216
            :.:|   |.:|  ....:|.:|....:.:.:.|:.|      |.|.||.:|:|  |....|::  
Zfish   249 RLEVDIGYQADVIGIFKQMPSKSYDMKTRKWTFLLEDYGKLMADLNELPTVET--EPLPHAVL-- 309

  Fly   217 RPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPK 281
            :.||...:..:....:....||                         |.::            |:
Zfish   310 QSFSSQFEKTESRAPVPPEADL-------------------------SHID------------PQ 337

  Fly   282 LLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVP 346
            |..|   |..:|..|:|:..   .:|...:|||:||||||:|.|...||.:    |:...|:|.|
Zfish   338 LTRS---LMPFQRDGVNFAV---SREGRLLLADDMGLGKTVQAICIAAYYR----SEWPLLVVAP 392

  Fly   347 SSTLDNWEAEISRWCPEL------VVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTP 405
            ||....|.....||.|.:      ||.|               .||......:.:.:|.::....
Zfish   393 SSVRFTWAEAFRRWLPSVKPDSINVVVK---------------GKDNLRSGLINIISYDLLNKMD 442

  Fly   406 EE--RKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI--NARMRILLTGTPLQNNLLELISLLC 466
            ::  ...|.|     :|.||:|.||||.|.|....:.:  .|:..|||:|||..:...||.:.:.
Zfish   443 KQPPSSPFNV-----IIMDESHFLKNMKTARCRAALPLLKTAKRVILLSGTPAMSRPAELYTQIQ 502

  Fly   467 FVMPKFFAKSIEDIKSLF--AKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLP 529
            .|.|..|.: ..|..:.:  ||:.....|....|...|.::...:.:|    |||||.:||..||
Zfish   503 AVRPALFPR-FHDFGTRYCDAKQLPWGWDYSSSSNLTELKLLLEESLM----LRRLKSEVLSQLP 562

  Fly   530 KKLSLVEKVP---MSSQQKIYYH----ELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLM 587
            .|...|..|.   ::|:.|...:    ||...|.|      .|.|:..:.:..      ||.   
Zfish   563 AKQRKVVTVTTDGINSRTKAALNAAARELAKGYHN------KSQEKEALLVFF------NHT--- 612

  Fly   588 RHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSG 652
                .:|.:|                        |:|            |:    |.|.|.|...
Zfish   613 ----AEAKIR------------------------AIM------------EY----ISDMLECGRE 633

  Fly   653 KFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGD 717
            ||                 |:|:...::||.:.:.|..:...|.|:||:|....||.|...|...
Zfish   634 KF-----------------LVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERFQAS 681

  Fly   718 DSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIE 782
            ....|.:||..|..:|:.|.:|...|..::.:||....|||||.||:||...|.|:.|:::.|.:
Zfish   682 QQSCVAVLSITAANMGLTLHSAALVVFAELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTAD 746

  Fly   783 EGILMAAEEKLKL-------EKDITSN-EKGEVHEQRCVVKLLTTALGLDKDQEEQL 831
            :.:....:.|:.:       |.:|:.| |....|.:......:|.......|::|.|
Zfish   747 DYLWPMIQAKMNVLEQVGLSESNISENAESASFHSRDRQQLTITEMFQRSFDEDEML 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 11/46 (24%)
HepA <276..795 CDD:440319 139/537 (26%)
smarcal1XP_073768103.1 None

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