DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etl1 and dom

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster


Alignment Length:1283 Identity:302/1283 - (23%)
Similarity:445/1283 - (34%) Gaps:534/1283 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AASASASASSSAKSSLSDLRQF-------------RINKNASSVVASPSRTERVPGKKRIQVMAD 58
            ||......::.||.|..|...|             ::.|...|   |..:||........:..|.
  Fly   715 AADVKEEVTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQS---SAIKTETPDDSDDSEFEAK 776

  Fly    59 SDSDGNDSQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCK 123
            ..||.:::...|:.:.|..:..|:|           .|.:.....|         ||..|....|
  Fly   777 EASDDDENTISKQEEAEQEIDHKKE-----------IDELEADNDL---------SVEQLLAKYK 821

  Fly   124 PKGHNGPLAKSKLKPRSNGISGGNFSDNDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVF 188
            .:....| .:.||.||...:.    ||:|.:..|..::|:|...:.::..|.:.|...       
  Fly   822 SEQPPSP-KRRKLAPRDPELD----SDDDSTAVDSTEESEDAATEDEEDLSTVKTDTD------- 874

  Fly   189 QFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSG---DLLN----YAQELI 246
                    :|.|..:....|..:|..|....:..|.     .:...||   |:||    .|:.|.
  Fly   875 --------MEEQDEQEDGLKSLMADADATSGAAGSG-----STAGASGNKDDMLNDAAALAESLQ 926

  Fly   247 NKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGI 311
            .|.||:::     .|:|:.:             |.||...|:  :||.|||:||..|:::::|||
  Fly   927 PKGNTLSS-----TNVVTPV-------------PFLLKHSLR--EYQHIGLDWLVTMNERKLNGI 971

  Fly   312 LADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDER 376
            ||||||||||||.||.||:|.....:...||||||||.:.|||.|..:|||...:..|:|||.||
  Fly   972 LADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKER 1036

  Fly   377 RRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI 441
            :..|..:.|.  ..|.|.:|:|.:|   .::::.||..|..|:|.|||..:||..:||:..|:..
  Fly  1037 KLKRVGWTKP--NAFHVCITSYKLV---VQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNF 1096

  Fly   442 NARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAK--KGKSDGDQDEVSQFQETQ 504
            :...|:|||||||||:|:||.||:.|:||..|: |..:.|..|:.  .|..:|:.    ::.||.
  Fly  1097 STERRLLLTGTPLQNDLMELWSLMHFLMPYVFS-SHREFKEWFSNPMTGMIEGNM----EYNETL 1156

  Fly   505 IQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNK-------GEV 562
            |.|..::::||:||||||:|.|.:|||...|....:|::|:..|.   |:.|..|       |.:
  Fly  1157 ITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYE---DFMSRAKTRETLQTGNL 1218

  Fly   563 CSSSERAGIAIMMEMRRIANHP------------------------------------------- 584
            .|.     |.::|::|::.|||                                           
  Fly  1219 LSV-----INVLMQLRKVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLN 1278

  Fly   585 LLMRH------------------------------------------------------------ 589
            ||:.|                                                            
  Fly  1279 LLLLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNA 1343

  Fly   590 ----------------------------------------------------------------- 589
                                                                             
  Fly  1344 VKVGASPAMRLEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPT 1408

  Fly   590 -------------------------------------YFTDANLRG--------FSKRLANAS-- 607
                                                 |.|.|...|        .||..|:||  
  Fly  1409 GALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTT 1473

  Fly   608 ----------------------------------------------------------------- 607
                                                                             
  Fly  1474 TSRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRK 1538

  Fly   608 ----------------------------------------SFKKTNEQ---YI------------ 617
                                                    |.|::..|   |.            
  Fly  1539 EQRLAALKRMAMINRRRTDATPIYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGW 1603

  Fly   618 --------FEELA-----VMSDFQVY--------------QMMNKHEFYD--------------- 640
                    |||..     |.::|.:|              .:.:.|..::               
  Fly  1604 SLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKL 1668

  Fly   641 -----------VKIPDNLIC--DSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRK 692
                       .|.||..:.  |.||...:|.||.:||..|||||:|:|.|.|||::|.:|....
  Fly  1669 ALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHG 1733

  Fly   693 FGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQA 757
            ..:.||||:|.|..||.|:..||||..||.|:|||::||||||||.|||.:.:|.|:||..|.||
  Fly  1734 HIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQA 1798

  Fly   758 EDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKL--------------------------- 795
            :|||||:||.|.|.||||:||.|||..||..|.:|..|                           
  Fly  1799 QDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTME 1863

  Fly   796 --EKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEEQLNNSLNNSIAS 841
              |:|.:|.||.|..::......|:.......:.|:|...:..:::|:
  Fly  1864 QSEQDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAA 1911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 6/40 (15%)
HepA <276..795 CDD:440319 235/917 (26%)
domNP_001286676.1 HSA 543..614 CDD:214727
HepA 692..>1235 CDD:440319 183/605 (30%)
DEXQc_SRCAP 949..1171 CDD:350761 101/233 (43%)
SF2_C_SNF 1685..1817 CDD:350180 70/131 (53%)
DISARM_DrmD_b <1702..>1936 CDD:468472 86/210 (41%)
HEC1 <1858..>2031 CDD:444066 10/54 (19%)
SP1-4_N 2486..>2819 CDD:425404
Blue background indicates that the domain is not in the aligned region.

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