DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etl1 and Chd7

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001264078.1 Gene:Chd7 / 320790 MGIID:2444748 Length:2986 Species:Mus musculus


Alignment Length:964 Identity:279/964 - (28%)
Similarity:429/964 - (44%) Gaps:241/964 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SASSSAKSSLSD-----LRQFRINKNASSVVASPSRTERVPGKKRIQVMADSDSDGNDSQTPKKT 72
            :|..|:|....|     :....:.:|:..|.....:.::.|..|:....:....:..:.:|||..
Mouse   600 AAGDSSKGFGKDDFPGGVENQELRRNSLDVSQEEKKKKKRPKVKKDPKESKEPKEKKEPKTPKAP 664

  Fly    73 KLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLK 137
            |:....|||:     |..::|.      .:|..:::            |.||......|.|...|
Mouse   665 KIPKEPKEKK-----AKTVTPK------PKSSKKSS------------NKKPDSEASALKKKVNK 706

  Fly   138 PRSNGISGGNF-----------SDND----------------HSDDDDVKQSKDQVYDSDDS--D 173
            .::.|....:.           .|.|                :::|.:.|.|.::..|:|.:  |
Mouse   707 GKTEGSENSDLDKTPPPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRD 771

  Fly   174 SEMSTKMTGQRKKVFQFMNEASLIE--LQSVKTLSEKKALAIIDVRPF-----------SDWSD- 224
            |..:|..:.|::.|..   |..::|  :.|.....:|::...::|..|           ..|:. 
Mouse   772 SPSNTSQSEQQESVDA---EGPVVEKIMSSRLVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASV 833

  Fly   225 --------LRQKLESIR-----------MSGDLLN-----------YAQELINKQNTVAAILSK- 258
                    ::||::..:           :..||.|           :|:...::...|...|.| 
Mouse   834 EDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVIHYLVKW 898

  Fly   259 CN----------------NMVSRLEKAISNGAGI--VEQP-----------KLLSSGLQLADYQI 294
            |:                ..:...||.:|.....  ||:|           :...:..:|.:||:
Mouse   899 CSLPYEDSTWELKQDIDQTKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLREYQL 963

  Fly   295 IGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFL--AYLKENGLSQAAHLIVVPSSTLDNWEAEI 357
            .|:|||........|.|||||||||||||.|.||  .|||  |: ....|::.|.||:.|||.|.
Mouse   964 EGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK--GI-HGPFLVIAPLSTIPNWEREF 1025

  Fly   358 SRWCPELVVEKYHGSQDERRRM----------RGRFAKDGFTGFDVLLTTYH-IVGSTPEERKMF 411
            ..| .||.|..|||||..||.:          :||..|..:. |..::||:. |:...||.|.:.
Mouse  1026 RTW-TELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYK-FHAIITTFEMILTDCPELRNIP 1088

  Fly   412 RVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMP-KF--- 472
            ..|    |:.||||.|||...:....|..::...::|||||||||.:.||.|||.|:.| :|   
Mouse  1089 WRC----VVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSE 1149

  Fly   473 --FAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNL-PKKLSL 534
              |.:...|:|:                   |.|:|:.:.|:||.:|||||:||.||| ||:.::
Mouse  1150 TTFMQEFGDLKT-------------------EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETI 1195

  Fly   535 VEKVPMSSQQKIYYHELVD----YYSNNKGEVCSSSERAGIA----IMMEMRRIANHPLLMRHYF 591
            :| |.:::.||.||..:::    :.|...|:       |.:.    .|||:|:..|||.|     
Mouse  1196 IE-VELTNIQKKYYRAILEKNFTFLSKGGGQ-------ANVPNLLNTMMELRKCCNHPYL----- 1247

  Fly   592 TDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLY 656
                :.|..:::  ...||:|:.       |...|||:..|:..               :||.:.
Mouse  1248 ----INGAEEKI--LEEFKETHN-------AESPDFQLQAMIQA---------------AGKLVL 1284

  Fly   657 LDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDS-I 720
            :|.|||||||.|||||:|||....|||:|:||..|::.:.|:||....|:||..|..|:..|| .
Mouse  1285 IDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDR 1349

  Fly   721 FVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGI 785
            |||||.|:|||:||||||||||:|.|.|:||.||.||:.||||:||.:.|.|||||:.::.|..:
Mouse  1350 FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREM 1414

  Fly   786 LMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTT---------ALGLDKDQEEQ 830
            ...|..||.|:|.:..:..|..:....|.:|...         |.|...|:|::
Mouse  1415 FDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDE 1468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 9/62 (15%)
HepA <276..795 CDD:440319 213/560 (38%)
Chd7NP_001264078.1 Glutenin_hmw <23..553 CDD:367362
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..146
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..180
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..246
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..307
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..412
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..792 38/217 (18%)
CD1_tandem_CHD5-9_like 786..850 CDD:349315 9/66 (14%)
CD2_tandem_CHD5-9_like 869..926 CDD:349310 7/56 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 928..949 3/20 (15%)
PLN03142 957..>1556 CDD:215601 219/581 (38%)
DEAH box 1095..1098 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1566..1590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1826..1851
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2151..2274
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2366..2393
BRK 2552..2593 CDD:462196
BRK 2631..2675 CDD:197800
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2812..2861
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2924..2986
Blue background indicates that the domain is not in the aligned region.

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