DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13124 and Ctif

DIOPT Version :9

Sequence 1:NP_001162923.1 Gene:CG13124 / 34310 FlyBaseID:FBgn0032156 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_038952934.1 Gene:Ctif / 364900 RGDID:1311887 Length:623 Species:Rattus norvegicus


Alignment Length:565 Identity:122/565 - (21%)
Similarity:183/565 - (32%) Gaps:180/565 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NDTRKVRKSPEFQ--------PGVISRERSFVRTSNQQNINKRRSLAFNVPGNQTGQMRGKPAMD 74
            ||..||  .|.:|        ..:...::.|.|..|.:...:|      .||....|..|.    
  Rat   159 NDIEKV--LPTWQGYHPMPHEVEIAHTKKLFRRRRNDRRRQQR------PPGGNKPQQHGD---- 211

  Fly    75 IYRPPNVRGELAAPAGGVGGDGPNGAIGGVANKLNVNAQEFTMTTSSGAPAEALGNRSSLILPLT 139
             ::|.:.:..........||.||:                     .||.|..             
  Rat   212 -HQPGSAKHNRDHQKSYQGGSGPH---------------------PSGRPTH------------- 241

  Fly   140 NGPGVGVAPGLGPYGNVNRRQAGHSLGNM---PGLK---ANHRSILVTYPINTGAL--------- 189
                         :|....|:..|  |||   ||.|   .:||:...|..:....|         
  Rat   242 -------------HGYSQNRRWHH--GNMKHPPGDKGEAGSHRNAKETVTVENPKLEDGPGDTGH 291

  Fly   190 SGQLPLMNSPSSGNILHTTNRVKFAPEPRGHKVASHNQFGQLNNNYAQPYQANINGVDPYMNGNA 254
            ||..|    |.|.:.|..|...:..|:..|...|...|     .:.|.|.:.   |..|.:  ..
  Rat   292 SGLEP----PCSPDTLTPTASERPTPQLPGGSEAETKQ-----KDTALPERL---GERPKI--TL 342

  Fly   255 LQRSKSLSSADALTRGMAGLGLGLGNEVADIGQ---------------FTPEIQALIDTALEDPN 304
            ||.||     |.|.|       .|..:|.||..               .||:.:..::.:...||
  Rat   343 LQSSK-----DRLRR-------RLKEKVPDIPNPTETSAPLRCVLCVPHTPQDEVAVEASNPQPN 395

  Fly   305 K-------LNS--------------------------RCLMELTSQFIKRAVESRRFALPISRLC 336
            |       |||                          ..|.|:.....::||..|.||...::||
  Rat   396 KMDRLTEILNSMRNNSSDVDAKLTSFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLC 460

  Fly   337 LNI-IAREQKETFLEALLNTCRQWYQEREKLLFAIQGMKSPSRVRFTAFMAFLTEMFCQLKRRQL 400
            ..: :...:...|...|||..::.:..||:|       :.....|:..|:.||.|:|        
  Rat   461 DKMALFMVEGTKFRSLLLNMLQKDFTVREEL-------QQQDVERWLGFITFLCEVF-------- 510

  Fly   401 QLRTHHEGTPPPL-VLLSLLSKCCGDCVRPPIRSLSEIECLFYVLTCIGQDMEQQLPQQLELLMS 464
              .|....|..|. ||:..:..|..:.::........:.|....|...|:.:|:|||:.:..|::
  Rat   511 --GTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLA 573

  Fly   465 LVRDAFLNAGESAASIRRTLLQLIELKASHWQ-LPGNTVLYYTHT 508
            ..||..|...||..: |..||::|||.|:.|. |......||..|
  Rat   574 SARDKMLCPSESMLT-RSLLLEVIELHANSWNPLTPPITQYYNRT 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13124NP_001162923.1 MIF4G 280..494 CDD:280935 59/263 (22%)
CtifXP_038952934.1 MIF4G 402..602 CDD:397130 51/217 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353031
Domainoid 1 1.000 67 1.000 Domainoid score I9598
eggNOG 1 0.900 - - E1_KOG3942
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23254
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.800

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