DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13124 and Mif4gd

DIOPT Version :10

Sequence 1:NP_609319.2 Gene:CG13124 / 34310 FlyBaseID:FBgn0032156 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001014144.1 Gene:Mif4gd / 360659 RGDID:1309685 Length:222 Species:Rattus norvegicus


Alignment Length:235 Identity:61/235 - (25%)
Similarity:112/235 - (47%) Gaps:32/235 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 IGQFTPEIQALIDTALEDPNKLNSRCLMELTSQFIKRAVESRRFALPISRLCLNIIAREQKE--- 346
            |..|..|.|.|:.|||:||..::   |..:.:..:..:::...|:....|:|..||..|.|:   
  Rat    11 IQSFDAETQQLLKTALKDPGAVD---LERVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQ 72

  Fly   347 -TFLEALLNTCRQWYQEREKL-LFAIQGMKSPSRVRFTAFMAFLTEMFCQLKRRQLQLRTHHEGT 409
             .|...|||..::.|..||:| ..::||        :..::.|:..:|..|:...:         
  Rat    73 SVFRRGLLNRLQKEYDAREQLRACSLQG--------WVCYVTFICNIFDYLRVNNM--------- 120

  Fly   410 PPPLVLLSLLSKCCGDCVRPPIRSLS---EIECLFYVLTCIGQDMEQQLPQQLELLMSLVRDAFL 471
             |.:.|::.:..|.....:|  .|||   |::||...|..:|:.:|:...|:::.|..|:||.||
  Rat   121 -PMMALVNPVYDCLFQLAQP--ESLSREEEVDCLVLQLHRVGEQLEKMNGQRMDELFILIRDGFL 182

  Fly   472 NAGESAASIRRTLLQLIELKASHWQ-LPGNTVLYYTHTNN 510
            ...:.::..|..||::||.:|:.|: .|.....||:..::
  Rat   183 LPIDLSSLARLLLLEIIEFRAAGWKTTPAAHKYYYSEVSD 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13124NP_609319.2 MIF4G 280..494 CDD:397130 57/216 (26%)
Mif4gdNP_001014144.1 MIF4G 8..179 CDD:413423 47/190 (25%)

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