DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS2 and RPS2

DIOPT Version :9

Sequence 1:NP_001260303.1 Gene:RpS2 / 34309 FlyBaseID:FBgn0004867 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_011392.1 Gene:RPS2 / 852754 SGDID:S000003091 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:245 Identity:151/245 - (61%)
Similarity:184/245 - (75%) Gaps:2/245 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG 82
            |||.|||.|||.. .||....:.|.|||||||||||:.|||.::|||:|:|||:|||:|||..| 
Yeast    11 RGGFGGRNRGRPN-RRGPRNTEEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL- 73

  Fly    83 SSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVP 147
            ..|:|||:.|.||||||||||||||||.|.:||:|||:|||:|.:||||.|||..||:|||||:|
Yeast    74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIP 138

  Fly   148 VRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGS 212
            :||||||..:|:||::..|.|||||||:|||||||||:|||::|..||||.:||:||.||.:.|.
Yeast   139 IRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGK 203

  Fly   213 TGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLSKPTPR 262
            |.||.|..||.:.||..||.:|||:||.|.||..:|...|||..|....|
Yeast   204 TRTLENTLKAAFVAIGNTYGFLTPNLWAEQPLPVSPLDIYSDEASAQKKR 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS2NP_001260303.1 uS5_euk_arch 37..245 CDD:273398 133/207 (64%)
Ribosomal_S5 85..149 CDD:278748 46/63 (73%)
Ribosomal_S5_C 168..235 CDD:281681 41/66 (62%)
RPS2NP_011392.1 PTZ00070 31..252 CDD:240255 139/221 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346388
Domainoid 1 1.000 101 1.000 Domainoid score I1551
eggNOG 1 0.900 - - E1_COG0098
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37714
Inparanoid 1 1.050 305 1.000 Inparanoid score I492
Isobase 1 0.950 - 0.928771 Normalized mean entropy S217
OMA 1 1.010 - - QHG62203
OrthoFinder 1 1.000 - - FOG0001382
OrthoInspector 1 1.000 - - oto99745
orthoMCL 1 0.900 - - OOG6_100429
Panther 1 1.100 - - LDO PTHR13718
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1244
SonicParanoid 1 1.000 - - X871
TreeFam 1 0.960 - -
1615.740

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