DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpS2 and AT3G57490

DIOPT Version :9

Sequence 1:	NP_001260303.1	Gene:	RpS2 / 34309	FlyBaseID:	FBgn0004867	Length:	267	Species:	Drosophila melanogaster
Sequence 2:	NP_191308.1	Gene:	AT3G57490 / 824916	AraportID:	AT3G57490	Length:	276	Species:	Arabidopsis thaliana

Alignment Length:	263	Identity:	185/263 - (70%)
Similarity:	217/263 - (82%)	Gaps:	6/263 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MADEAPARSGFRG----GFGSRGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSL 61
            ||:....|.|.||    |||.|||..|..|||||.| ||..|:.| |||||||||||:||||..:
plant     1 MAERGVERGGDRGDFGRGFGGRGGGRGGPRGRGRRA-GRAPEEEK-WVPVTKLGRLVKEGKITKI 63

  Fly    62 EEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 126
            |:|||:|||:||::|||..:|.||||||:||||||||||||||||||||:.:||:|||:||||||
plant    64 EQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 128

  Fly   127 SKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAP 191
            |||||||||||||||||||||:||||||||||||||||||||||||||:||::|||||:|||:|.
plant   129 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAAR 193

  Fly   192 VPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFL 256
            ||||:|..|||:|.:||:||||.|||||.|||:..:.|||.:|||:.|||.....:|||.::|||
plant   194 VPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPYQEHTDFL 258

  Fly   257 SKP 259
            ..|
plant   259 LIP 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpS2	NP_001260303.1	uS5_euk_arch	37..245	CDD:273398	157/207 (76%)
		Ribosomal_S5	85..149	CDD:278748	57/63 (90%)
		Ribosomal_S5_C	168..235	CDD:281681	44/66 (67%)
AT3G57490	NP_191308.1	uS5_euk_arch	41..248	CDD:273398	157/207 (76%)
		Ribosomal_S5	87..151	CDD:278748	57/63 (90%)
		Ribosomal_S5_C	170..237	CDD:281681	44/66 (67%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	123	1.000	Domainoid score	I1828
eggNOG	1	0.900	-	-		E1_COG0098
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H37714
Inparanoid	1	1.050	377	1.000	Inparanoid score	I546
OMA	1	1.010	-	-		QHG62203
OrthoDB	1	1.010	-	-		D1197354at2759
OrthoFinder	1	1.000	-	-		FOG0001382
OrthoInspector	1	1.000	-	-		otm2824
orthoMCL	1	0.900	-	-		OOG6_100429
Panther	1	1.100	-	-	O	PTHR13718
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X871
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840