DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS2 and Mrps5

DIOPT Version :9

Sequence 1:NP_001260303.1 Gene:RpS2 / 34309 FlyBaseID:FBgn0004867 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_084239.1 Gene:Mrps5 / 77721 MGIID:1924971 Length:432 Species:Mus musculus


Alignment Length:264 Identity:56/264 - (21%)
Similarity:100/264 - (37%) Gaps:51/264 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GFGSRGGRGGRGRGRGRWARGRGK-----EDSKEW----VPVTKLGRLVREGKIKSLEEIYLYSL 69
            |.|:|.|||.|.:.:.|....||:     .....|    ||:.|.|.:...|:....|:..:.:.
Mouse   109 GAGARKGRGKRTKKKKRKDLNRGQIIGEGRSGFLWPGLNVPLIKSGVVQNIGQRSKEEQQKVEAT 173

  Fly    70 PIKEFEIIDFFLGSSLKDE-------------------------------VLKIMPVQKQT-RAG 102
            .:::.|..|......:|.|                               :|::..|...| :.|
Mouse   174 MVEQREEWDRKRKIKVKRERGWSGNTWGGVSIGPPDPGPNGETYEDFDTRILEVRNVFNMTAKEG 238

  Fly   103 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKV 167
            ::...:..||:|:.||..|..:..:.:...|.|.|...|...:..:.| |.|      ||:...:
Mouse   239 RKKSVRVLVAVGNGNGAAGFAIGKAADRGDAFRKAKNRAIHYLHYIER-YEG------HTIFHDI 296

  Fly   168 TGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAK--T 230
            :.:.....:|:...|||.|:........:..:.||:|.|....||...| |..:..:..:|:  |
Mouse   297 SLRFKRTQIRMKKQPRGYGLRCHRAIITICRLIGIKDMYARVTGSMNML-NLTRGLFHGLARQET 360

  Fly   231 YAYL 234
            :.:|
Mouse   361 HQHL 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS2NP_001260303.1 uS5_euk_arch 37..245 CDD:273398 46/241 (19%)
Ribosomal_S5 85..149 CDD:278748 16/95 (17%)
Ribosomal_S5_C 168..235 CDD:281681 16/69 (23%)
Mrps5NP_084239.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..130 7/19 (37%)
rpsE_bact 219..374 CDD:130093 35/154 (23%)
Ribosomal_S5 220..285 CDD:278748 14/64 (22%)
Ribosomal_S5_C 299..367 CDD:281681 16/67 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0098
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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