DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS2 and Mrps5

DIOPT Version :10

Sequence 1:NP_476874.1 Gene:RpS2 / 34309 FlyBaseID:FBgn0004867 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_084239.1 Gene:Mrps5 / 77721 MGIID:1924971 Length:432 Species:Mus musculus


Alignment Length:264 Identity:56/264 - (21%)
Similarity:100/264 - (37%) Gaps:51/264 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GFGSRGGRGGRGRGRGRWARGRGK-----EDSKEW----VPVTKLGRLVREGKIKSLEEIYLYSL 69
            |.|:|.|||.|.:.:.|....||:     .....|    ||:.|.|.:...|:....|:..:.:.
Mouse   109 GAGARKGRGKRTKKKKRKDLNRGQIIGEGRSGFLWPGLNVPLIKSGVVQNIGQRSKEEQQKVEAT 173

  Fly    70 PIKEFEIIDFFLGSSLKDE-------------------------------VLKIMPVQKQT-RAG 102
            .:::.|..|......:|.|                               :|::..|...| :.|
Mouse   174 MVEQREEWDRKRKIKVKRERGWSGNTWGGVSIGPPDPGPNGETYEDFDTRILEVRNVFNMTAKEG 238

  Fly   103 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKV 167
            ::...:..||:|:.||..|..:..:.:...|.|.|...|...:..:.| |.|      ||:...:
Mouse   239 RKKSVRVLVAVGNGNGAAGFAIGKAADRGDAFRKAKNRAIHYLHYIER-YEG------HTIFHDI 296

  Fly   168 TGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAK--T 230
            :.:.....:|:...|||.|:........:..:.||:|.|....||...| |..:..:..:|:  |
Mouse   297 SLRFKRTQIRMKKQPRGYGLRCHRAIITICRLIGIKDMYARVTGSMNML-NLTRGLFHGLARQET 360

  Fly   231 YAYL 234
            :.:|
Mouse   361 HQHL 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS2NP_476874.1 PTZ00070 37..257 CDD:240255 46/241 (19%)
Mrps5NP_084239.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..130 7/19 (37%)
rpsE_bact 219..374 CDD:130093 35/154 (23%)

Return to query results.
Submit another query.