Protein Alignment RpS2 and mRpS5

DIOPT Version :10

• Sequence 1: NP_476874.1
• Gene: RpS2 / 34309
• FlyBaseID: FBgn0004867
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_001036652.1
• Gene: mRpS5 / 3355089
• FlyBaseID: FBgn0287187
• Length: 407
• Species: Drosophila melanogaster
• Alignment Length: 283
• Identity: 57/283 - (20%)
• Similarity: 106/283 - (37%)
• Gaps: 64/283 - (22%)

  Fly     3 DEAPARSGFRG--GFGSRGGRGGRGRGRG-RWARGRGKEDS-------KEW----VPVTKLGRLV 53
            ::.||...:||  ...:.|.:.|||:|.| :.|:...|..|       :.|    .|:.:...|:
  Fly    46 NKLPAEDIWRGVTAVSNAGKKRGRGKGSGKKVAKDLNKGQSIGFGKCGRIWPGLNSPLIRGNELI 110

  Fly    54 REGKIK--------------SLEEIYLYSL---------------------PIKEFEIIDFFLGS 83
            .:.|:.              |:....|..|                     |:.:.|.:.|.. .
  Fly   111 NQQKLNENLDRENGILKLRDSMGSFKLMKLNPIDRGWSGSKMPGRSIGPPDPVGDEEFVSFDT-R 174

  Fly    84 SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPV 148
            .|:::::.||    :...|::.|:......|:.||..|.....:.||.||:|.:...|...::.:
  Fly   175 VLENKIVFIM----KGNMGRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI 235

  Fly   149 RRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
                   .:.:..|:........|...:.....|.|.|:|.....:.:..:.||:|.|....|||
  Fly   236 -------SLCENRTIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293

  Fly   214 GTLGNFAKATYAAI--AKTYAYL 234
             .:.|.|||.:..:  .::|.|:
  Fly   294 -NIQNIAKAFFIGLMTQRSYQYI 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS2	NP_476874.1	PTZ00070	37..257	CDD:240255	46/246 (19%)
mRpS5	NP_001036652.1	rpsE	176..316	CDD:234790	34/152 (22%)