Protein Alignment RpS2 and mRpS5

DIOPT Version :9

• Sequence 1: NP_001260303.1
• Gene: RpS2 / 34309
• FlyBaseID: FBgn0004867
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_001036652.1
• Gene: mRpS5 / 3355089
• FlyBaseID: FBgn0287187
• Length: 407
• Species: Drosophila melanogaster
• Alignment Length: 283
• Identity: 57/283 - (20%)
• Similarity: 106/283 - (37%)
• Gaps: 64/283 - (22%)

  Fly     3 DEAPARSGFRG--GFGSRGGRGGRGRGRG-RWARGRGKEDS-------KEW----VPVTKLGRLV 53
            ::.||...:||  ...:.|.:.|||:|.| :.|:...|..|       :.|    .|:.:...|:
  Fly    46 NKLPAEDIWRGVTAVSNAGKKRGRGKGSGKKVAKDLNKGQSIGFGKCGRIWPGLNSPLIRGNELI 110

  Fly    54 REGKIK--------------SLEEIYLYSL---------------------PIKEFEIIDFFLGS 83
            .:.|:.              |:....|..|                     |:.:.|.:.|.. .
  Fly   111 NQQKLNENLDRENGILKLRDSMGSFKLMKLNPIDRGWSGSKMPGRSIGPPDPVGDEEFVSFDT-R 174

  Fly    84 SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPV 148
            .|:::::.||    :...|::.|:......|:.||..|.....:.||.||:|.:...|...::.:
  Fly   175 VLENKIVFIM----KGNMGRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI 235

  Fly   149 RRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGST 213
                   .:.:..|:........|...:.....|.|.|:|.....:.:..:.||:|.|....|||
  Fly   236 -------SLCENRTIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293

  Fly   214 GTLGNFAKATYAAI--AKTYAYL 234
             .:.|.|||.:..:  .::|.|:
  Fly   294 -NIQNIAKAFFIGLMTQRSYQYI 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS2	NP_001260303.1	uS5_euk_arch	37..245	CDD:273398	46/246 (19%)
		Ribosomal_S5	85..149	CDD:278748	15/63 (24%)
		Ribosomal_S5_C	168..235	CDD:281681	18/69 (26%)
mRpS5	NP_001036652.1	Ribosomal_S5	171..235	CDD:278748	16/68 (24%)
		rpsE_bact	178..323	CDD:130093	33/150 (22%)
		Ribosomal_S5_C	251..318	CDD:281681	18/66 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452814
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0098
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR13718
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840