DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS2 and Rps2

DIOPT Version :9

Sequence 1:NP_001260303.1 Gene:RpS2 / 34309 FlyBaseID:FBgn0004867 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_032529.2 Gene:Rps2 / 16898 MGIID:105110 Length:293 Species:Mus musculus


Alignment Length:281 Identity:220/281 - (78%)
Similarity:238/281 - (84%) Gaps:19/281 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADEAPA--------------RSGFRGGFGS--RG-GRG-GRGRGRGRWARGRGKEDSKEWVPVT 47
            |||:|.|              |.||||||||  || ||| ||||||||.||| ||.:.|||:|||
Mouse     1 MADDAGAAGGPGGPGGPGLGGRGGFRGGFGSGLRGRGRGRGRGRGRGRGARG-GKAEDKEWIPVT 64

  Fly    48 KLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVA 112
            ||||||::.||||||||||:||||||.||||||||:|||||||||||||||||||||||||||||
Mouse    65 KLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVA 129

  Fly   113 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
            |||.|||:||||||||||||||||||||||||:||||||||||||||||||||||||:||||.||
Mouse   130 IGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVR 194

  Fly   178 LIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEM 242
            ||||||||||||||||||||.||||:||||||||.|.|||||||||:.||:|||:|||||||||.
Mouse   195 LIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKET 259

  Fly   243 PLGSTPYQAYSDFLSKPTPRL 263
            ....:|||.::|.|.|...|:
Mouse   260 VFTKSPYQEFTDHLVKTHTRV 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS2NP_001260303.1 uS5_euk_arch 37..245 CDD:273398 182/207 (88%)
Ribosomal_S5 85..149 CDD:278748 60/63 (95%)
Ribosomal_S5_C 168..235 CDD:281681 56/66 (85%)
Rps2NP_032529.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 31/54 (57%)
PTZ00070 54..273 CDD:240255 186/218 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849795
Domainoid 1 1.000 132 1.000 Domainoid score I5107
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37714
Inparanoid 1 1.050 420 1.000 Inparanoid score I1773
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62203
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001382
OrthoInspector 1 1.000 - - oto93850
orthoMCL 1 0.900 - - OOG6_100429
Panther 1 1.100 - - LDO PTHR13718
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1244
SonicParanoid 1 1.000 - - X871
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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