Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001035417.1 | Gene: | chrna2a / 678575 | ZFINID: | ZDB-GENE-040108-2 | Length: | 520 | Species: | Danio rerio |
Alignment Length: | 542 | Identity: | 204/542 - (37%) |
---|---|---|---|
Similarity: | 286/542 - (52%) | Gaps: | 84/542 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LLIFLA-----IIKESCQGPH-EKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEK 72
Fly 73 NQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVK 137
Fly 138 HNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLSDFITNGE 202
Fly 203 WYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGE 267
Fly 268 KLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 332
Fly 333 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP-GRKITRKTILLS 396
Fly 397 NRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEEH------------ 449
Fly 450 -----HTAIGCNH--KDLHLI--------------LKELQFITARMRKADDEAELIGDWKFAAMV 493
Fly 494 VDRFCLIVFTLFTIIATVTVLL 515 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 204/542 (38%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 90/180 (50%) | ||
chrna2a | NP_001035417.1 | LIC | 9..513 | CDD:273305 | 204/542 (38%) |
Neur_chan_LBD | 37..243 | CDD:280998 | 101/206 (49%) | ||
Neur_chan_memb | 250..511 | CDD:280999 | 95/303 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |