Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065135.2 | Gene: | CHRNA10 / 57053 | HGNCID: | 13800 | Length: | 450 | Species: | Homo sapiens |
Alignment Length: | 536 | Identity: | 179/536 - (33%) |
---|---|---|---|
Similarity: | 266/536 - (49%) | Gaps: | 121/536 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LSLFVLLIFLAIIKESCQGPHEK---RLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVD 70
Fly 71 EKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIV 135
Fly 136 VKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLSDFITN 200
Fly 201 GEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDS 265
Fly 266 GEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLG 330
Fly 331 TYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLP---WILRMGRP-GRKITRK 391
Fly 392 TILLSNRMKELELKERS--------------------SKSLLANVLDIDDDFRHTISGSQTAIGS 436
Fly 437 SASFGRPTTVEEHHTAIGCNHKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIV 501
Fly 502 FTLFTIIATVTVLLSA 517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 176/532 (33%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 81/180 (45%) | ||
CHRNA10 | NP_065135.2 | LIC | 31..442 | CDD:273305 | 167/502 (33%) |
Neur_chan_LBD | 32..235 | CDD:280998 | 88/203 (43%) | ||
Neur_chan_memb | 243..434 | CDD:280999 | 74/281 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 355..380 | 6/34 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 73 | 1.000 | Domainoid score | I9252 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D363540at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |