Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
Alignment Length: | 636 | Identity: | 125/636 - (19%) |
---|---|---|---|
Similarity: | 219/636 - (34%) | Gaps: | 187/636 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDSPLPASLSLFVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQ 65
Fly 66 IIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD-LRITPN---KLWKPDVLMYNSADEGF 126
Fly 127 DGTYHT----NIVVK--HNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQL--- 182
Fly 183 ------------DLVLNSED-----GGDLSDFI---------------------TNGEWYLLAMP 209
Fly 210 GKKNTIVYAC----------------------------------CPEPYVDITFTIQIRRRTLYY 240
Fly 241 FFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTIL 305
Fly 306 LSLTVFLNLVAET-LPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHR------------- 356
Fly 357 ------------TAD--------IHEMPPWIKSVFLQWLPWILRMG----RPGRKITRKTILLSN 397
Fly 398 RMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEEHHTA--IGCNHKDL 460
Fly 461 HLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATV 511 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 121/626 (19%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 48/265 (18%) | ||
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 49/225 (22%) |
LIC | 111..670 | CDD:273305 | 120/605 (20%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 63/308 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447314 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |