Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 402 | Identity: | 88/402 - (21%) |
---|---|---|---|
Similarity: | 151/402 - (37%) | Gaps: | 112/402 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SPLPASLSLFV-LLIFLAIIKESCQGPHEK--------------------RLLNHLLSTYNTLER 46
Fly 47 PVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITP--- 108
Fly 109 NKLWKPDVLMYNSADEGFDGTYHTN--IVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMK 171
Fly 172 FGSWTY----------DGNQLDLV-LNSEDGGDLSDF-------------ITNGEWYLLAMPGKK 212
Fly 213 NTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPD-SGEKLTLGVTIL 276
Fly 277 LSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVA 341
Fly 342 SSVVLTVVVLNY 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 85/394 (22%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 45/209 (22%) | ||
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 45/209 (22%) |
Neur_chan_memb | 274..588 | CDD:397193 | 26/111 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447323 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |