Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317792.1 | Gene: | lgc-29 / 3896858 | WormBaseID: | WBGene00044528 | Length: | 398 | Species: | Caenorhabditis elegans |
Alignment Length: | 330 | Identity: | 81/330 - (24%) |
---|---|---|---|
Similarity: | 152/330 - (46%) | Gaps: | 45/330 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 HEKRLLNHLLSTYN-------TLER-PVANES-EP--LEVKFGLTLQQIIDVDEKNQILTTNAWL 82
Fly 83 NLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM---YNSADEGFDGTYHTNIVVKHNGSC-L 143
Fly 144 YVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLS---DFITNGEWYL 205
Fly 206 LAMPGKKNTIVYACCPEPYVD-----ITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDS 265
Fly 266 -GEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFL-NLVAETLPQVSDAIPL 328
Fly 329 LGTYF 333 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 81/330 (25%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 46/192 (24%) | ||
lgc-29 | NP_001317792.1 | LIC | 38..>337 | CDD:273305 | 76/312 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |