Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023533.2 | Gene: | lgc-8 / 3564870 | WormBaseID: | WBGene00013338 | Length: | 438 | Species: | Caenorhabditis elegans |
Alignment Length: | 520 | Identity: | 127/520 - (24%) |
---|---|---|---|
Similarity: | 211/520 - (40%) | Gaps: | 148/520 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 KRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNE 95
Fly 96 TEYGGVKDLRITPNKLWKPDVLMYNSADEG-------------FDGTYHTNIVVKHNGSCLYVPP 147
Fly 148 GIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDL------SDFITNGEW--- 203
Fly 204 YLLAMPGKKNTIVYACCPEPYVDITFT-----IQIRRRTLYYFFNLIVPCVLISSMALLG-FTLP 262
Fly 263 PDSG---EKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSD 324
Fly 325 AIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRPGRKIT 389
Fly 390 RKTILLSNRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEE-HHTAI 453
Fly 454 GCN-HKDLHLILKELQFITARMRKAD-DEAELIGDWKFAAMVVDRFCLIVFTLFTI-IATVTVLL 515
Fly 516 515 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 127/520 (24%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 45/207 (22%) | ||
lgc-8 | NP_001023533.2 | Neur_chan_LBD | 29..237 | CDD:280998 | 54/232 (23%) |
Neur_chan_memb | 244..>348 | CDD:280999 | 41/140 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I7808 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |