Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 524 | Identity: | 113/524 - (21%) |
---|---|---|---|
Similarity: | 211/524 - (40%) | Gaps: | 122/524 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PLPASLSLFVLLIFLAIIKESCQGPHEK--------RLLNHLLSTYNTLERPVANESEPLEVKFG 60
Fly 61 LTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEG 125
Fly 126 FDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSED 190
Fly 191 GG---DLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLIS 252
Fly 253 SMALLGFTLPPD-SGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVA 316
Fly 317 ETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVL----NYHHRTADIHEMPPWIKSVFLQWL-P 376
Fly 377 WILRMGRPGRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFG 441
Fly 442 RPTTVEEHHTAIGCNHKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTL-F 505
Fly 506 TIIA 509 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 111/517 (21%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 45/183 (25%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 108/502 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 52/207 (25%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 50/269 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447302 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |