Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_572194.1 | Gene: | CG6927 / 31419 | FlyBaseID: | FBgn0029733 | Length: | 524 | Species: | Drosophila melanogaster |
Alignment Length: | 602 | Identity: | 130/602 - (21%) |
---|---|---|---|
Similarity: | 213/602 - (35%) | Gaps: | 183/602 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDSPLPASLSLFVLLIFLAIIKESC------QGPHEKRLLNHLL--STYNTLERPV----ANESE 53
Fly 54 PLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETE------YGGVKDLRITPNKLW 112
Fly 113 KPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKST--CKIDITWFPFDDQHCEMKFGSW 175
Fly 176 TYDGNQLDLVLNSE-------DGG-DLSDFITNGEWYLLAMPGKKNTIVYACCPE--------PY 224
Fly 225 VDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSG-EKLTLGVTILLSLTVFLNLVAE 288
Fly 289 SMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYF-NCIMFMVASSVVLTVVVLN 352
Fly 353 YHHRTADIHEMPPWIKSVFLQWLPWILRMGRPGRKITRKTILLSNRMKELELKERS---SKS--- 411
Fly 412 --------------------LLAN----------VLD----------IDDDFRHTISGSQTAIGS 436
Fly 437 SASFGRPTTVEEHHTAIGCNHKDLHLILKELQFITARMRKADDEAEL-IGDW-----KFAAMVVD 495
Fly 496 ---RF----CLIVFTLF 505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 127/592 (21%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 44/204 (22%) | ||
CG6927 | NP_572194.1 | LIC | 3..520 | CDD:273305 | 129/600 (22%) |
Neur_chan_LBD | 36..259 | CDD:280998 | 53/234 (23%) | ||
Neur_chan_memb | 270..518 | CDD:280999 | 68/321 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447260 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |