| Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_502905.2 | Gene: | lgc-19 / 190895 | WormBaseID: | WBGene00013655 | Length: | 400 | Species: | Caenorhabditis elegans |
| Alignment Length: | 307 | Identity: | 75/307 - (24%) |
|---|---|---|---|
| Similarity: | 152/307 - (49%) | Gaps: | 23/307 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 30 EKRLLNHLLSTYN----------TLERPVANESE-PLEVKFGLTLQ--QIIDVDEKNQILTTNAW 81
Fly 82 LNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSAD-EGFDGTYHTNIVVKHNGSCL-Y 144
Fly 145 VPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNS--EDGGDLSDFIT--NGEWYL 205
Fly 206 LAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLG-FTLPPDSGEKL 269
Fly 270 TLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVA 316 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 75/307 (24%) |
| LGIC_ECD_nAChR | 55..236 | CDD:349798 | 45/188 (24%) | ||
| lgc-19 | NP_502905.2 | LGIC_ECD_cation | 75..257 | CDD:349790 | 45/183 (25%) |
| LGIC_TM_cation | 259..>346 | CDD:349853 | 23/80 (29%) | ||
| TM1 helix | 263..284 | CDD:349853 | 4/20 (20%) | ||
| TM2 helix | 292..313 | CDD:349853 | 5/20 (25%) | ||
| TM3 helix | 323..346 | CDD:349853 | 4/15 (27%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I7808 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR18945 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.010 | |||||