Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001293778.1 | Gene: | lgc-10 / 177409 | WormBaseID: | WBGene00022247 | Length: | 450 | Species: | Caenorhabditis elegans |
Alignment Length: | 366 | Identity: | 91/366 - (24%) |
---|---|---|---|
Similarity: | 161/366 - (43%) | Gaps: | 42/366 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LPASLSLFVLLIFLAIIKES-CQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIID 68
Fly 69 VDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYH-T 132
Fly 133 NIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLSDF 197
Fly 198 ITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLP 262
Fly 263 PDS----GEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVS 323
Fly 324 DAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMP 364 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 90/360 (25%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 44/181 (24%) | ||
lgc-10 | NP_001293778.1 | Neur_chan_LBD | 28..229 | CDD:280998 | 50/206 (24%) |
Neur_chan_memb | 236..>342 | CDD:280999 | 32/125 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I7808 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |