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Protein Alignment nAChRalpha6 and CHRNA1
DIOPT Version :9
Sequence 1: | NP_995675.1 |
Gene: | nAChRalpha6 / 34304 |
FlyBaseID: | FBgn0032151 |
Length: | 523 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_016858745.1 |
Gene: | CHRNA1 / 1134 |
HGNCID: | 1955 |
Length: | 489 |
Species: | Homo sapiens |
Alignment Length: | |
Identity: | / - (0%) |
Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
nAChRalpha6 | NP_995675.1 |
LIC |
11..517 |
CDD:273305 |
|
LGIC_ECD_nAChR |
55..236 |
CDD:349798 |
|
CHRNA1 | XP_016858745.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
73 |
1.000 |
Domainoid score |
I9252 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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