Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775304.1 | Gene: | Chrnb3 / 108043 | MGIID: | 106212 | Length: | 464 | Species: | Mus musculus |
Alignment Length: | 522 | Identity: | 174/522 - (33%) |
---|---|---|---|
Similarity: | 267/522 - (51%) | Gaps: | 89/522 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LLIFLAIIKE--------------SCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQ 64
Fly 65 QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGT 129
Fly 130 YHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDL 194
Fly 195 SDFITNGEWYLL---AMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMAL 256
Fly 257 LGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQ 321
Fly 322 VSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTAD-IHEMPPWIKSVFLQWLPWILRMGRPG 385
Fly 386 RKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEEHH 450
Fly 451 TAIGCNHKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLL 515
Fly 516 SA 517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 173/520 (33%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 80/183 (44%) | ||
Chrnb3 | NP_775304.1 | LIC | 6..455 | CDD:273305 | 172/519 (33%) |
Neur_chan_LBD | 35..239 | CDD:280998 | 92/209 (44%) | ||
Neur_chan_memb | 246..452 | CDD:280999 | 73/270 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 368..387 | 3/18 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |