Protein Alignment nAChRalpha6 and LOC103909988

DIOPT Version :9

• Sequence 1: NP_995675.1
• Gene: nAChRalpha6 / 34304
• FlyBaseID: FBgn0032151
• Length: 523
• Species: Drosophila melanogaster
• Sequence 2: XP_021326666.1
• Gene: LOC103909988 / 103909988
• -ID: -
• Length: 114
• Species: Danio rerio
• Alignment Length: 93
• Identity: 43/93 - (46%)
• Similarity: 61/93 - (65%)
• Gaps: 2/93 - (2%)

  Fly    30 EKRLLNHLLST--YNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 92
            |:||:.|||:.  ||.|.||..|.||.:.|:..::|.|:|.|.|:.||:|||.||..||.||.|.
Zfish    21 EERLVEHLLNPAHYNKLIRPATNGSEVVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWQDYRLT 85

  Fly    93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
            |:..|:.|:|.:|:....:|.|||::||
Zfish    86 WSPEEFDGMKKVRLPSKHIWLPDVVLYN 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nAChRalpha6	NP_995675.1	LIC	11..517	CDD:273305	43/93 (46%)
		LGIC_ECD_nAChR	55..236	CDD:349798	29/66 (44%)
LOC103909988	XP_021326666.1	Neur_chan_LBD	21..>114	CDD:332142	43/93 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D845098at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010