Protein Alignment nAChRalpha6 and si:ch211-256e16.4

DIOPT Version :9

• Sequence 1: NP_995675.1
• Gene: nAChRalpha6 / 34304
• FlyBaseID: FBgn0032151
• Length: 523
• Species: Drosophila melanogaster
• Sequence 2: XP_017210328.1
• Gene: si:ch211-256e16.4 / 100333796
• ZFINID: ZDB-GENE-131121-267
• Length: 179
• Species: Danio rerio
• Alignment Length: 128
• Identity: 30/128 - (23%)
• Similarity: 62/128 - (48%)
• Gaps: 30/128 - (23%)

  Fly   224 YVD-ITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVA 287
            |.| :.:.|.|:||.|.:..|:|:|......:.:..:.:..|..:||:..||:||:::|.|.::.
Zfish     4 YADQLIYQITIKRRPLLHVINIILPVFFFLVLDVTSYFIDTDGADKLSFKVTLLLAISVLLLILN 68

  Fly   288 ESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVV 350
            :::|:|:..:||||:                             |.:.|..::..|::.|::|
Zfish    69 DTLPSTTYELPLIGI-----------------------------YCSAIFSLIGISILETILV 102

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nAChRalpha6	NP_995675.1	LIC	11..517	CDD:273305	30/128 (23%)
		LGIC_ECD_nAChR	55..236	CDD:349798	4/12 (33%)
si:ch211-256e16.4	XP_017210328.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910