Sequence 1: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002934647.1 | Gene: | chrna1 / 100145177 | XenbaseID: | XB-GENE-977139 | Length: | 457 | Species: | Xenopus tropicalis |
Alignment Length: | 520 | Identity: | 185/520 - (35%) |
---|---|---|---|
Similarity: | 284/520 - (54%) | Gaps: | 82/520 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDSPLPASLSLFV--LLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTL 63
Fly 64 QQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDG 128
Fly 129 TYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSE-DGG 192
Fly 193 DLSDFITNGEWYLLAMPGKKNTIVYACCPE-PYVDITFTIQIRRRTLYYFFNLIVPCVLISSMAL 256
Fly 257 LGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQ 321
Fly 322 VSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWIL---RMGR 383
Fly 384 PGRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEE 448
Fly 449 HHTAIGCNHKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTV 513
Fly 514 513 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 182/510 (36%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 83/182 (46%) | ||
chrna1 | XP_002934647.1 | LIC | 21..447 | CDD:273305 | 178/492 (36%) |
LGIC_ECD_nAChR_A1 | 22..231 | CDD:349815 | 94/210 (45%) | ||
Cys-loop | 148..162 | CDD:349815 | 7/13 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 64 | 1.000 | Domainoid score | I9936 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |