DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13123 and Nnk

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:299 Identity:62/299 - (20%)
Similarity:107/299 - (35%) Gaps:69/299 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EELPMICNDCLEDCLQQYAFFRKLTFANQQLLQLYNE-----------AEVEMCQVKMDATEEEP 103
            ||..:..|...||...:..|.::.....||  |.|.:           .|.:.|: :....|||.
  Fly   135 EESEVNENKEFEDIACEIPFSKEDDEQEQQ--QEYEDMVDKKTGHDDGEESQECE-ESQPDEEES 196

  Fly   104 ENQASDEFEILEEFRRI------PLDYVVLDPDRPTETRQTRRRT--DSCTKPSQRLA------N 154
            :....||.|..|:...:      ..|   .|.|..::...|.|::  |...||.::..      |
  Fly   197 QQNEEDEEESQEDDDELWQNEDGDSD---TDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKN 258

  Fly   155 QDSLIVSEFL-PA-----TTAQPRLDLSDSQLEQL-ESPAYEMRTVDYAAV---ELKHYNLDEYN 209
            .|    ::|| ||     |....::.:.|...::. :...:.:..:.::.|   |.......|:|
  Fly   259 DD----TDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQKEFN 319

  Fly   210 E--ANRLLDVEPSGSQAIYKCQYCPLAYASPQYLKTHVRNSH---------VCKYCTTAFAKVRD 263
            .  .|..:.|:..|.:. |.||:|...:........|....|         .|.||...:.    
  Fly   320 RYILNIHIRVKHRGEKP-YACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYE---- 379

  Fly   264 LNEHIRQKHP-------HHQCVVCSNNFSTSSNLRAHLK 295
             :.:.|.||.       :..|.||..:|:.:|||:.|.:
  Fly   380 -SNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776 8/31 (26%)
PHA00733 175..272 CDD:177301 18/111 (16%)
C2H2 Zn finger 228..245 CDD:275368 3/16 (19%)
C2H2 Zn finger 251..272 CDD:275368 4/20 (20%)
KREPA <269..>303 CDD:483960 11/34 (32%)
C2H2 Zn finger 277..298 CDD:275368 8/19 (42%)
NnkNP_650659.2 zf-AD 4..74 CDD:214871
C2H2 Zn finger 282..302 CDD:275368 1/19 (5%)
C2H2 Zn finger 310..331 CDD:275368 4/20 (20%)
C2H2 Zn finger 339..360 CDD:275368 4/20 (20%)
C2H2 Zn finger 371..388 CDD:275370 5/21 (24%)
zf-met 397..421 CDD:463736 8/21 (38%)
C2H2 Zn finger 399..417 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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