DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13123 and Ovol3

DIOPT Version :9

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001276749.1 Gene:Ovol3 / 365226 RGDID:1583800 Length:190 Species:Rattus norvegicus


Alignment Length:104 Identity:33/104 - (31%)
Similarity:44/104 - (42%) Gaps:16/104 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 PSGSQAIYKCQYCPLAYASPQYLKTHVR-----NSHVCKYCTTAFAKVRDLNEHIRQKHPH---- 274
            |.|...: .|..||.|:...:.|..|::     ..|||.||...|....||..|:|   .|    
  Rat    63 PKGPGTL-SCPLCPKAFPLQRMLTRHLKCHSPARRHVCHYCGKGFHDAFDLKRHMR---THTGIR 123

  Fly   275 -HQCVVCSNNFSTSSNLRAHLKKIHGVQLPAQVALLDYR 312
             .:|..|...|:...:|.|||.|:||  .||..|..:.|
  Rat   124 PFRCGACGKAFTQRCSLEAHLAKVHG--QPASYAYRERR 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:285071
PHA00733 175..272 CDD:177301 18/57 (32%)
C2H2 Zn finger 228..245 CDD:275368 5/16 (31%)
C2H2 Zn finger 251..272 CDD:275368 8/20 (40%)
C2H2 Zn finger 277..298 CDD:275368 8/20 (40%)
Ovol3NP_001276749.1 COG5048 <19..>127 CDD:227381 19/67 (28%)
C2H2 Zn finger 71..91 CDD:275368 6/19 (32%)
zf-C2H2 97..119 CDD:278523 10/24 (42%)
C2H2 Zn finger 99..119 CDD:275368 8/22 (36%)
zf-H2C2_2 111..136 CDD:290200 8/27 (30%)
C2H2 Zn finger 127..148 CDD:275368 8/20 (40%)
C2H2 Zn finger 166..186 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10032
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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