DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13123 and ovol1b

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_003200887.2 Gene:ovol1b / 100534921 ZFINID:ZDB-GENE-091204-357 Length:285 Species:Danio rerio


Alignment Length:178 Identity:45/178 - (25%)
Similarity:76/178 - (42%) Gaps:33/178 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SCTKPSQR---LANQDSLIVSEFLPATTAQPRLDLSDSQLEQLESPAYEMRTVDYAAVELK---- 201
            ||...:|:   ..:..|.:.|..||:..||.:....|.:.      ....::|.|...::|    
Zfish    53 SCLTAAQKNSTFLHVQSHVPSAQLPSFAAQGQPGNHDPEC------CIRTQSVPYMRSKIKVTTG 111

  Fly   202 ----HYNLDEYNEANRLLDVEPSGSQAIYKCQYCPLAYASPQYLKTHVR-----NSHVCKYCTTA 257
                |......| |.:::|:.|:.|.  ..||.|...:.:.:.||.|::     ..:.|::|...
Zfish   112 NMPSHQPASPEN-ARKIVDIPPADSG--LSCQVCQKTFTTARMLKRHLKCHSETKKYSCEHCGKG 173

  Fly   258 FAKVRDLNEHIRQKHPH-----HQCVVCSNNFSTSSNLRAHLKKIHGV 300
            |....||..|:|   .|     ::|.:|:..|:...:|.|||||||.|
Zfish   174 FNDTFDLKRHVR---THTGVRPYKCTMCAKAFTQRCSLEAHLKKIHAV 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776
PHA00733 175..272 CDD:177301 23/109 (21%)
C2H2 Zn finger 228..245 CDD:275368 5/16 (31%)
C2H2 Zn finger 251..272 CDD:275368 7/20 (35%)
KREPA <269..>303 CDD:483960 14/37 (38%)
C2H2 Zn finger 277..298 CDD:275368 9/20 (45%)
ovol1bXP_003200887.2 None
Blue background indicates that the domain is not in the aligned region.

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