DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4036 and nmad-1

DIOPT Version :10

Sequence 1:NP_609314.1 Gene:CG4036 / 34302 FlyBaseID:FBgn0032149 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_741141.1 Gene:nmad-1 / 175765 WormBaseID:WBGene00017304 Length:291 Species:Caenorhabditis elegans


Alignment Length:318 Identity:89/318 - (27%)
Similarity:140/318 - (44%) Gaps:82/318 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CGCKGVRTCLSCE-----------QDFH---------------IAKTSLREQFQQLEAWSYCIQC 45
            |||||.|.|..||           :|.|               |..|:|..| ..||        
 Worm     8 CGCKGARFCALCETTERVKKLRVVEDKHVNYKVFIYDHIRQIAIPTTNLNSQ-SSLE-------- 63

  Fly    46 DLLQRGWDTNHVQKDHENHKKDEGLPLPGILVQEEFLSVDEGAQLIADLDDLPWDISQSGRRKQN 110
            |::........|       ..|..:.:.|:.:...|||..|.::::..:|.:.|..||||||||:
 Worm    64 DIIDESTSCQSV-------STDGSIEIDGLTLIHNFLSESEESKILNMIDTVEWAQSQSGRRKQD 121

  Fly   111 FGPKTNFKKRKLRLGSFAGFPRTTEYVQRRFE--DVPLLRGFQTIEQCSLEYEPSKGASIDPHVD 173
            :|||.|||.:|::..:|.|.|...:.:..:..  ||..|..:|..|.|:||||..|.::|:.|.|
 Worm   122 YGPKVNFKHKKVKTDTFVGMPEYADMLLNKMSEYDVKKLGNYQPFEMCNLEYEEVKKSAIEMHQD 186

  Fly   174 DCWIWGERVVTVNCLGDSVLTLTPYEVQQSGKYNLDLVASYEDELLAPLLTDDQLATFEGKVLRI 238
            |.||||.|::::|.:..||:||:                           .|::  :|   :..:
 Worm   187 DMWIWGNRLISINLINGSVMTLS---------------------------NDNK--SF---LCYV 219

  Fly   239 PMPNLSLIVLYGPARYQFEHSVLREDVQERRVCVAYREFTPMYINGVDIQKGDPVREK 296
            .||:.||:.:....||.::|.||...::.||:.:..||...      |..:|..:.||
 Worm   220 HMPHRSLLCMADECRYDWKHGVLAHHIRGRRIALTMREAAK------DFAEGGELYEK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4036NP_609314.1 None
nmad-1NP_741141.1 2OG-FeII_Oxy 85..256 CDD:473886 63/202 (31%)

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