DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk11 and asic1a

DIOPT Version :9

Sequence 1:NP_001334672.1 Gene:ppk11 / 34299 FlyBaseID:FBgn0065109 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_021333995.1 Gene:asic1a / 791696 ZFINID:ZDB-GENE-040513-2 Length:614 Species:Danio rerio


Alignment Length:554 Identity:108/554 - (19%)
Similarity:190/554 - (34%) Gaps:180/554 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SIKCQPLQRFKKPNERATNLYRNLKRLKILRWYNRVSK------RFEEFPLPKFLGFLQARNDDG 85
            ::.|.|:|...:.             |::.:|.|:..|      :.|    |..:.|.|      
Zfish    91 TVVCFPVQHLSEV-------------LQLSQWRNKSMKTSVMDLKVE----PMDIDFDQ------ 132

  Fly    86 LCKRKTGFEIYCEMASIHGF-HIFVGAK-TWQRILWWLLICNAVLLSFTLVIMSLSMSKETPTIR 148
                ....:::...:::||. |||...| |.:..||.:...:::.....:.|..:....|.|.:.
Zfish   133 ----PPPLQVFAHTSTLHGISHIFSYEKITAKCCLWVVFFLSSLTFLMYVCIDRIQFYLEYPHVT 193

  Fly   149 FIDTMMKPTAEVPFPAVTICGFNTKEWMNSSQ-----------IVNQRN-ASWLELLEDLALPIC 201
            .:|.:..|.  :.|||||||..|:..:...::           ::|.|: .....|:|:..:.:.
Zfish   194 KLDEITTPV--MVFPAVTICNLNSIRFSRITRNDLYHAGELLALLNSRHEVREAHLVEESVMEVL 256

  Fly   202 PQIKICQWDNRMVNCLDQLQP----IWTL---------DQRLCCSFNYN-------KQLFSSYLG 246
            ..    :.|.|      ..:|    :|..         |..|.|.|..:       ..:|:.| |
Zfish   257 KS----KTDFR------SFKPRHFNMWEFYNRTGHDIKDMLLSCQFRGSPCRPEDFSVVFTRY-G 310

  Fly   247 VSFVLRS-------------------------NDEIL-------QSSKSAGFEVLIHESHEIP-- 277
            ..:...|                         .||.|       :||..||.:|.||...|.|  
Zfish   311 KCYTFNSGETGPPRVSVKGGMGNGLEIMLDIQQDEYLPVWGESDESSFEAGIKVQIHSQDEPPFI 375

  Fly   278 ----NGATP--RVFVPGESDAHIML-RPYINRFTKNLKGLSLQKRGCYFSTERRLILSDVYNQIN 335
                .|..|  :.||..:....:.| .|:                |...||.........|:...
Zfish   376 DQLGFGVAPGFQTFVSCQEQRLVYLPAPW----------------GSCKSTPPSSDYFRAYSISA 424

  Fly   336 CLAECRTESILKSCGC----IPPKSPIEKSWLIC-DLKQMQC---VIDFDHDEIISGEQKNCDCL 392
            |..:|.|..::::|.|    :|..:|      .| .:...:|   .:||    ::..:...|.|.
Zfish   425 CRTDCETRYLVENCNCRMVHMPGDAP------YCTPVLYKECAHPALDF----LVETDSDYCSCE 479

  Fly   393 PPCEFNRYEFQSDIRFIKGMINNSIVNTSNQETTNEVRVRVYYDSAIAEE-LLLDVYENWLTF-- 454
            .||...||  ..::.|:|.....|:...:.:.:.:|        ..|.|. ::|||:...|.:  
Zfish   480 TPCNITRY--SKELSFVKIPSKASVKYLAKKYSKSE--------KYITENVMVLDVFFEALNYET 534

  Fly   455 ------------IGTFGGITGLFMGCSFVSVFEL 476
                        :|..||..|||:|.|.:::.||
Zfish   535 IEQRKAYEVAGLLGDIGGQMGLFIGASILTILEL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk11NP_001334672.1 None
asic1aXP_021333995.1 ASC 136..582 CDD:322155 97/482 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586609
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.970

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