DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk11 and acd-4

DIOPT Version :9

Sequence 1:NP_001334672.1 Gene:ppk11 / 34299 FlyBaseID:FBgn0065109 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_505230.1 Gene:acd-4 / 185036 WormBaseID:WBGene00017879 Length:613 Species:Caenorhabditis elegans


Alignment Length:505 Identity:110/505 - (21%)
Similarity:196/505 - (38%) Gaps:113/505 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 IFVGAKTWQRILWWLLICNAVL--LSFTLVIMSLSMSKETPTIRFIDTMMKPTAEVPFPAVTICG 169
            ||.|.::.|  ::|:|:..::|  |.:.:||: :......||:..|:.:....| |.||:||:|.
 Worm    51 IFYGKRSAQ--IFWILVVISILAFLVYQIVIL-IQYFYSKPTLSQINFITNEGA-VYFPSVTVCN 111

  Fly   170 FNTKEW-----MNSS-----QIVNQ------------RNASWLEL----LEDLA-LPICPQIKI- 206
            .|..:.     :|||     :::|.            .||:..||    |..|. |...|..:| 
 Worm   112 LNPVKTSFIKKLNSSGDLSEELLNYLLATKTNSMYMFNNANIFELKRAHLNALVYLANHPDFEIV 176

  Fly   207 ----------------CQWDNRMVNCLDQL-QPIWTLDQRLCCSFNYNKQL-----------FSS 243
                            |.:..:..||...: |.|.:|.:  |...|...:.           .|.
 Worm   177 NFLNSAQFDCDELFETCFYGGKQFNCCKYMTQSITSLGR--CWELNLRNETDAWLTKKGRSGTSP 239

  Fly   244 YLGVSFV--LRSNDEIL----QSSKSAGFEVLIHESHEIPNGATPRVFVPGESDAHIMLRPYINR 302
            ..|:..:  .|.:::.:    .|.:..||...||..|..|:.|...:.|......:..::..::.
 Worm   240 KTGLQIIANARQSEQFINFHYSSFQENGFRYFIHPPHVSPDLAAEGITVSPSRVVNSAIKTVLHD 304

  Fly   303 FTKNLKGLSLQKRG-CYFSTERRLILSDVYNQINCLAECRTESILKSCGCIPPKSPIEKSWLIC- 365
            .      |:.:..| |..|.......:..|:...|.|.|.:....|.|||.|....|:.:..:| 
 Worm   305 L------LNHENWGNCTSSWPEHYNTNLPYSSSACQALCVSNYFKKLCGCSPYSYNIDNNTQVCL 363

  Fly   366 DLKQMQCVID----FDHDEIISGEQKNC-DCLPPCEFNRYEFQSDIRFIKGMINNSI--VNTSNQ 423
            ..:::.|:::    .|.:..:|.:...| :|...|:  :..:.|...:..|...||:  :.....
 Worm   364 PYEEVICMMEKMTKSDSNGTVSLDFPFCAECHLACQ--KTSYSSYTSYGDGFNYNSMKWLTRETN 426

  Fly   424 ETTNEVRVRVYYDSAIAEELLLDVYE--NWLTFIGTFG---GITGLFMGCSFVSVFELI-FFSCV 482
            .:.:.:|..:...:....||....|.  ...|.:.||.   |:.||:.|.|.||:.||| :|:.:
 Worm   427 RSASYIRQNIAIINIHFMELFYTSYSQVKATTILNTFNKIFGLNGLWFGMSVVSLTELILYFTKI 491

  Fly   483 RPTCNWLT----RQQILW-------RRRRN-----QRVGITESRSLGPAN 516
                :|:.    |:|.|:       |:.||     |...|:.||....||
 Worm   492 ----SWIAVSSKRRQYLFEKKMSEKRKERNIEEAVQEAEISRSRRSSAAN 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk11NP_001334672.1 None
acd-4NP_505230.1 ASC 39..487 CDD:279230 96/449 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162316
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

Return to query results.
Submit another query.