DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk11 and del-9

DIOPT Version :9

Sequence 1:NP_001334672.1 Gene:ppk11 / 34299 FlyBaseID:FBgn0065109 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:583 Identity:110/583 - (18%)
Similarity:194/583 - (33%) Gaps:169/583 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LQRFKKPNERATNLYRNLKRLKILRW--YNRVSKRFEEFPLPKFLGFLQARNDDGLCKRKTGFEI 95
            ::|.||.|       ..||:....||  .:|.|.|..:......|......|||.|       .:
 Worm    32 IRRLKKEN-------HCLKKTLSRRWSGRSRASTRSHDPTDASSLSDSSDDNDDSL-------YL 82

  Fly    96 YCEMASIHGFH-IFVGAKTWQRILWWLLICNAVLLSFT---LVIMSLSMSKETPTIRFIDTMMKP 156
            ..|.:::||.. :.:.:....|::|.|::..|:.::|.   .::...||.:..     :...::.
 Worm    83 LRETSTLHGLRDVMLSSSGRLRMVWVLIVILALFMTFQGCYQIMDEYSMRRIV-----VSYFIQE 142

  Fly   157 TAEVPFPAVTICGFNTKEWMNSSQIVNQRNASWLELLEDLALPI----CPQIKICQWDNRMVNCL 217
            ...:..|.|.:|.:|.   :|.| .:...|.|: ||.:.|.|..    .|...|.|....:::.:
 Worm   143 AQSIWVPDVVVCPYNR---LNRS-FIEANNVSF-ELAQFLELSFPSMDLPFENIQQQQEEIISKI 202

  Fly   218 DQLQPIWTLDQRLCCSFNYNKQLFSSYLGVSFVLRSNDEILQSSKSAGFEVLIHESHEIPN---- 278
            |      |||.::......|...::.:|              ...|...|....:|....|    
 Worm   203 D------TLDFQIEILLEQNNMTYAQFL--------------RKASLNCEAFFEDSRRCANTTEI 247

  Fly   279 -----------GATPRVFVPGESDAHIM------LRPYINRFTKNLKGLSLQKRGCYFSTERRLI 326
                       |....:...|..|.:::      ..|.||:...:...:.|.:||.....:...:
 Worm   248 MTSAGKCFRMAGIKQEIAGFGNGDRYVIDLPEEYYNPGINQMINSGVIIKLAERGQGIDNDLTFL 312

  Fly   327 LSDV-----------------------------YNQINCLAECRTESILKSCGCIP-----PKSP 357
            .:.|                             |::::|..:|.|....::|.|.|     |..|
 Worm   313 PAGVHAIMPLLGTQFEFMNDPPRYECEEDPHGNYSRVHCFEDCLTLDAQQTCQCSPAAAQNPAYP 377

  Fly   358 IEKSWLICDLKQM-QCVID--FDHDE-----IISGEQKNCDCLPPCEFNRYEFQSDIRFIKGMIN 414
            .:    :|...|: .|...  |..|.     |:...:|  :|..||....|..|.....|....:
 Worm   378 DK----LCTATQLYHCFFTKLFPEDSNLSKAIVDACKK--ECKAPCHAWNYNKQVSYSSIPSEAS 436

  Fly   415 NSIVNTSNQETTNEVRVRVYYDSAIAEELLLDVYENWLTF--------------IGTFGGITGLF 465
            ..::.....|             .:..:::||:|.:.|.:              |...||...||
 Worm   437 KKLLPREEWE-------------KMKRKIILDIYYSELDYTIIKHVIAMPLSSLIAQIGGQFSLF 488

  Fly   466 MGCSFVSVFELIFFS--------C----VRPTCNWL-----TRQQILWRRRRNQRVGITESRS 511
            .|.|.:|:.:::.:|        |    .|..|...     .||:...||||  |...:.|||
 Worm   489 AGGSLISLCQIVIYSVRYVMHKFCGLKSQRRRCRETREAHEARQRRDMRRRR--RNSTSHSRS 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk11NP_001334672.1 None
del-9NP_508622.2 ASC 85..502 CDD:307141 80/465 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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