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Protein Alignment CG17633 and Cpa2

DIOPT Version :9

Sequence 1:	NP_609310.2	Gene:	CG17633 / 34297	FlyBaseID:	FBgn0032144	Length:	430	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	399	Identity:	145/399 - (36%)
Similarity:	228/399 - (57%)	Gaps:	40/399 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 RMYKVNSENAKQLEVLKDLEGSSDSIMFLD------------GVHLVGADIQIIVAPHKVPDFLE 83
            ::.:|...:.:|::.|..||  ::..:.||            .|.:..|.||.:    ||  |||
Mouse    24 QVLEVIPNDEEQIKTLLQLE--AEEHLELDFWKSPSVPRQTVHVRVPFASIQDV----KV--FLE 80

  Fly    84 ILGKSEIKYELQSRDVQKSLDEIDEKVAIKGRAT--TAYNWAQYYELDDTYAWLQSLAQTNPGVV 146
            ..|   |.|.:...|||..||:..|::....:..  |.:|:..|:.|::.|..:.:|...|||:|
Mouse    81 SQG---ITYSIMIEDVQVLLDQEREEMLFNQQRERGTNFNFGAYHTLEEIYQEMDNLVAENPGLV 142

  Fly   147 TLIEGGKTYQGRSILGVKITKGGETINGKAKPGIFLEAGIHAREWIAPAAATFIINQLLTSEVEN 211
            :.:..|.:::.|.:..:|.:.||:      ||.|:|:||||||||:..|.|.:..|::.:....:
Mouse   143 SKVNIGSSFENRPMNVLKFSTGGD------KPAIWLDAGIHAREWVTQATALWTANKIASDYGTD 201

  Fly   212 --IKELAENYTWYVLPHANPDGYVYTHTTNRLWRKTRTP-YGS-CFGADPNRNWGFHWNEVGASS 272
              |..|......::||..||||||::.|:||:|||||:. .|| |.|.||||||..::...||||
Mouse   202 PAITSLLNTLDVFLLPVTNPDGYVFSQTSNRMWRKTRSKRSGSFCVGVDPNRNWDANFGGPGASS 266

  Fly   273 SACSDTYAGPSAFSEIETLSLSKFIEGLKGKVQLYLSLHAYSQYLLYPYGHTSDLPDNVADFEKV 337
            :.|||:|.|||..||:|..|:..||:. .|||:.:::||:|||.|::|||:....||:..:.::|
Mouse   267 NPCSDSYHGPSPNSEVEVKSIVDFIKS-HGKVKAFITLHSYSQLLMFPYGYKCAKPDDFNELDEV 330

  Fly   338 FDASIAAVNKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPA 402
            ...:..::.:.:||:|..|.|...||.|:|.|:||||.. .::.:|.:|||  .|.|. ||.|||
Mouse   331 AQRAAQSLKRLHGTSYKVGPICSVIYQASGGSIDWAYDL-GIKYSFAFELR--DTGYY-GFLLPA 391

  Fly   403 EQIVPASEE 411
            :||:|.:||
Mouse   392 KQILPTAEE 400

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.