DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17633 and sdc-3

DIOPT Version :9

Sequence 1:NP_609310.2 Gene:CG17633 / 34297 FlyBaseID:FBgn0032144 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:395 Identity:77/395 - (19%)
Similarity:130/395 - (32%) Gaps:129/395 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DFLEI-LGKSEIKYELQSRD---VQKS--------LDEI--------DEKVAIKGRATTAYNWAQ 124
            ||::. :..:.|||....|:   ||:|        |.|:        :||:..|.|.....|:.:
 Worm   652 DFVKFPISNTGIKYTAPRRNQPKVQRSLVTYTRFRLAELEDKDFSFPEEKMLEKNRLLEKLNFEE 716

  Fly   125 YYELDDTYAWLQSLAQTNPGVVTLIEGGKTYQGRSILGVKITKGGETINGKAK---PGIFLEAGI 186
            ..:||   |.:....:..|.::. .:|....|...::..::.:..:..:||.|   |.::.:|..
 Worm   717 RLQLD---ALMSKDVKYKPRMIP-EKGFLQLQDEKLILKRLCEKEDEWSGKQKRRFPDLYEQATQ 777

  Fly   187 HAREWIAPAAATFIINQLLTSEVENIKELAENYTW------------------------YVLPHA 227
            .|.....|.|:        ||...| |||.....|                        |::...
 Worm   778 EAERLGDPDAS--------TSGTSN-KELGLLPVWKHDDFRDLKKINVLGSKEYPISSPYLIKRL 833

  Fly   228 NPD-----------GYVYTHTTNRLWRKTRTPYGSCFGADPNRNWGFHWNEVGASSSACSDTYAG 281
            :.|           .::|   ...||.|.:..|.........|.  ..|:|:.|:..|..:.   
 Worm   834 HYDIHLEIVRDKLKSWIY---RTELWEKMKPVYERLKRDKEKRE--KEWHEMRAAQRAQKEK--- 890

  Fly   282 PSAFSEIETLSLSKFIEGLKGKVQLYLSL-HAYSQYLLYPYGHTSDLPDNVADFEKVFDASIAAV 345
                .|.:...:...||  .|:..|..|: ....|.:|.|....:       .||::..|...| 
 Worm   891 ----EEEDQRRMDMGIE--HGQESLLKSITPEVEQQILLPISREN-------SFEEMLPAPQEA- 941

  Fly   346 NKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPAEQIVPASE 410
                         ||       ..:|     ||:.:.|     ..:.|..||.:|.:|     ..
 Worm   942 -------------YD-------EDLD-----QDIDIHF-----DGAESVCTGIRLDSE-----DR 971

  Fly   411 ELLDS 415
            ||:||
 Worm   972 ELVDS 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17633NP_609310.2 MpaA 7..374 CDD:225421 65/352 (18%)
Propep_M14 34..105 CDD:280416 10/36 (28%)
M14_CP_A-B_like 125..423 CDD:199844 61/330 (18%)
sdc-3NP_506703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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