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Protein Alignment CG17633 and Cpb2

DIOPT Version :9

Sequence 1:	NP_609310.2	Gene:	CG17633 / 34297	FlyBaseID:	FBgn0032144	Length:	430	Species:	Drosophila melanogaster
Sequence 2:	NP_446069.1	Gene:	Cpb2 / 113936	RGDID:	71035	Length:	422	Species:	Rattus norvegicus

Alignment Length:	436	Identity:	119/436 - (27%)
Similarity:	215/436 - (49%)	Gaps:	40/436 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 LFALLAIVASASVSAERVRYDNYRMYKVNSENAKQLEVLKDLEGSSDSIM-------FLD---GV 62
            |:.|..:||........:.:.:..:.......::|:::|::|..:.:.::       |::   .|
  Rat     3 LYGLGVLVAIILYEKHGLAFQSGHVLSALPRTSRQVQLLQNLTTTYEVVLWQPVTAEFIEKKKEV 67

  Fly    63 HLV--GADIQIIVAPHKVPDFLEILGKSEIKYELQSRDVQKSLDEIDEKVAIKGRATTAYNWAQY 125
            |..  .:|:..:.|         .|..|.|.:.:...:|:..:.:......:..||:::| :.||
  Rat    68 HFFVNASDVNSVKA---------YLNASRIPFNVLMNNVEDLIQQQTSNDTVSPRASSSY-YEQY 122

  Fly   126 YELDDTYAWLQSLAQTNPGVVTLIEGGKTYQGRSILGVKITKGGETINGKAKPGIFLEAGIHARE 190
            :.|::.|:|::.:.:.:|.::..|..|.:|:...:..:|:: |.|   .:.|..|:::.||||||
  Rat   123 HSLNEIYSWIEVITEQHPDMLQKIYIGSSYEKYPLYVLKVS-GKE---HRVKNAIWIDCGIHARE 183

  Fly   191 WIAPAAATFIINQL--LTSEVENIKELAENYTWYVLPHANPDGYVYTHTTNRLWRKTRTPY--GS 251
            ||:||...:.|..:  ...:......|..:..:|::|..|.|||.||...||:|||.|:.:  ..
  Rat   184 WISPAFCLWFIGYVTQFHGKENTYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSVHMNNR 248

  Fly   252 CFGADPNRNWGF-HWNEVGASSSACSDTYAGPSAFSEIETLSLSKFIEGLKGKVQLYLSLHAYSQ 315
            |.|.|.|||:.. ||.|.||||.:||:||.|....||.|..:::.|:......::.|:|:|:|||
  Rat   249 CVGTDLNRNFASKHWCEKGASSFSCSETYCGLYPESEPEVKAVADFLRRNINHIKAYISMHSYSQ 313

  Fly   316 YLLYPYGHTSDLPDNVADFEKVFDASIAA---VNKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQ 377
            .:|:||.:......:..:...|...::.|   :||  .|.||.|:..:::|.|.|.|.||.|..
  Rat   314 QILFPYSYNRSKSKDHEELSLVASEAVRAIESINK--NTRYTHGSGSESLYLAPGGSDDWIYDL- 375

  Fly   378 DVRMAFCYELRPSSTSYLTGFKLPAEQIVPASEELLDSIVAMATEV 423
            .::.:|..|||.:..   .||.||...|.|...|.|.::..:|..|
  Rat   376 GIKYSFTIELRDTGR---YGFLLPERFIKPTCAEALAAVSKIAWHV 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.