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Protein Alignment CG17633 and Cpa1

DIOPT Version :9

Sequence 1:	NP_609310.2	Gene:	CG17633 / 34297	FlyBaseID:	FBgn0032144	Length:	430	Species:	Drosophila melanogaster
Sequence 2:	NP_079626.2	Gene:	Cpa1 / 109697	MGIID:	88478	Length:	419	Species:	Mus musculus

Alignment Length:	423	Identity:	140/423 - (33%)
Similarity:	237/423 - (56%)	Gaps:	48/423 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 LLAIVASASVSAERVRYDNYRMYKVNSENAKQLEVLKDLEGSSDSIMFLDGVHL--------VGA 67
            :|:::.:|....|  .:..:::.::::.:..|::.:::||.       |:.:.|        .|.
Mouse     6 VLSVLLAAVFGNE--NFVGHQVLRISATDEAQVQKVRELEE-------LEHLKLDFWRDPARAGL 61

  Fly    68 DIQIIVAPHKVPDFLEILGKSEIKYELQSRDVQKSLDEIDEKV-AIKGRA--TTAYNWAQYYELD 129
            .|.:.|....:......|...:|.||:...|||..|||..::: |.:.||  |.|:|:|.|:.||
Mouse    62 PIDVRVPFPTIQSVKAFLEYHDISYEIMIEDVQSLLDEEKQQMSAFQARALSTDAFNYATYHTLD 126

  Fly   130 DTYAWLQSLAQTNPGVVTLIEGGKTYQGRSILGVKITKGGETINGKAKPGIFLEAGIHAREWIAP 194
            :.|.::..|...:|.:|:.|:.|.|::||.|..:|.:.||..     :|.|:::.|||:|||:..
Mouse   127 EIYEFMDLLVTEHPQLVSKIQIGSTFEGRPINVLKFSTGGTN-----RPAIWIDTGIHSREWVTQ 186

  Fly   195 AAATFIINQL---------LTSEVENIKELAENYTWYVLPHANPDGYVYTHTTNRLWRKTR--TP 248
            |:..:...::         ||:.::|:....|..|       ||||:||||.|||:|||||  |.
Mouse   187 ASGVWFAKKITKDYGQEPTLTAILDNMDIFLEIVT-------NPDGFVYTHKTNRMWRKTRSHTE 244

  Fly   249 YGSCFGADPNRNWGFHWNEVGASSSACSDTYAGPSAFSEIETLSLSKFIEGLKGKVQLYLSLHAY 313
            ...|.|.||||||...:...||||:.||:||.|....||:|..|:..|:.. .|.::.::|:|:|
Mouse   245 GSLCVGVDPNRNWDAAFGMPGASSNPCSETYRGKFPNSEVEVKSIVDFVTS-HGNIKAFISIHSY 308

  Fly   314 SQYLLYPYGHTSDLPDNVADFEKVFDASIAAVNKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQD 378
            ||.||||||:||:...:..:.:::..:::.|:...:||.:..|:|.|.||.|:|:::||.| :|.
Mouse   309 SQLLLYPYGYTSEPAPDKEELDQLAKSAVTALTSLHGTKFKYGSIIDTIYQASGSTIDWTY-SQG 372

  Fly   379 VRMAFCYELRPSSTSYLTGFKLPAEQIVPASEE 411
            ::.:|.:|||.:.   |.||.|||.||:|.:||
Mouse   373 IKYSFTFELRDTG---LRGFLLPASQIIPTAEE 402

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.