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Protein Alignment CG4017 and Cpa5

DIOPT Version :9

Sequence 1:	NP_609309.1	Gene:	CG4017 / 34296	FlyBaseID:	FBgn0032143	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	422	Identity:	134/422 - (31%)
Similarity:	229/422 - (54%)	Gaps:	28/422 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LLSVNILIFCLAERQRFDNYKVYRVSPVKANQLEGLRSLEANSEDALVLNNLHLGPTDFLVAPDF 71
            ||..|.::.....:..|...:|.||......||..||.||......:   :...||....:..|.
Mouse    21 LLFCNFILAVAWGQVNFTGDQVLRVLAKNEKQLSLLRDLETQKPQKV---DFWRGPARPSLPVDM 82

  Fly    72 DGTFLKL------VKDLDLSPELIDANAQTSLSLDIEPIADA---NRRSDDYSWSEYHELNDTHR 127
            ...|.:|      :|...|:..::..:.|..|..:.:.:|.:   .|.::.:|:|.||.|::.:.
Mouse    83 RVPFSELPSVKAYLKSHGLAYSIMIKDIQVLLDEERDAMAKSRRLERSTNSFSYSSYHTLDEIYS 147

  Fly   128 WMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEAGMHAREWIGPATATYFA 192
            |:.|.|.::.::||....|:|:|.|.:|.|:.  :.|...:.:|:::.|:|:||||..||..:.:
Mouse   148 WIDNFVAEHSNLVSKIHIGKSFENRSILVLKF--STGGPNRPAIWIDTGIHSREWITHATGIWIS 210

  Fly   193 NELLSSQQQE-----IMNLARSYVWYILPHANPDGYVYTHKTNRMWRKTRSPQDK-NCVGTDPNR 251
            .:::::..::     |:|....::..:   .||||:.:||..||:|||.:|.|.. .|:|.|.||
Mouse   211 QKIVNAYGKDHVLKRILNTMDIFIEIV---TNPDGFAFTHSMNRLWRKNKSSQPGIFCIGVDLNR 272

  Fly   252 NWDFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPMFMFLSLHSFSQLLLYPYGHT 316
            ||...:...|::.:||||:|.||...|||||..:..|:........| :|:||:||:::|||||:
Mouse   273 NWKAGFGGNGSNKNPCSETYRGPAPESEPEVAAIVDFITGHGNFKAM-ISIHSYSQMVMYPYGHS 336

  Fly   317 SALPENHRQLEQIFNTAVGAMKRRYGTRYTGGNVYDAIYPAAGSSMDWAYGVLNVKYSFTYELRP 381
            .....||.:|..:...||.|:.:.:|.:|..|::...:|.|:|.|:||||. ..:||:|::|||.
Mouse   337 LEPVPNHEELFNLAKDAVKALNKVHGIQYIFGSISTTLYSASGISVDWAYD-SGIKYAFSFELRD 400

  Fly   382 SGYSFWTGFRLPAAQIIPTGQETTDSLVEMIK 413
            :|.   .||.|||:||:||.:||..:|..::|
Mouse   401 TGQ---YGFLLPASQIVPTAEETWMALQTIMK 429

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.