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Protein Alignment CG4017 and Cpb2

DIOPT Version :9

Sequence 1:	NP_609309.1	Gene:	CG4017 / 34296	FlyBaseID:	FBgn0032143	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	442	Identity:	147/442 - (33%)
Similarity:	233/442 - (52%)	Gaps:	57/442 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MKLLLLLLSVNILIFCLAERQ--RFDNYKVYRVSPVKANQLEGLRSLEANSEDALVL-------- 55
            |||..|.:.|.|:::   |:.  .|.:.:|....|..:.|::.|::|....|  :||
Mouse     1 MKLHGLGILVAIILY---EQHGFAFQSGQVLSALPRTSRQVQLLQNLTTTYE--VVLWQPVTAEF 60

  Fly    56 ----NNLHLGPTDFLVAPDFDGT----------FLKLVKDLDLSPELIDANAQTSLSLDIEPIAD 106
                ..:|.    |:.|.|.|..          |..|:.:::   :||:   |.:.:..:.|.|.
Mouse    61 IEKKKEVHF----FVNASDVDSVKAHLNVSRIPFNVLMNNVE---DLIE---QQTFNDTVSPRAS 115

  Fly   107 ANRRSDDYSWSEYHELNDTHRWMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSI 171
            |:      .:.:||.||:.:.|::.:..::||::.....|.|:|...|..|:::..:.|. |.:|
Mouse   116 AS------YYEQYHSLNEIYSWIEVITEQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRI-KNAI 173

  Fly   172 FLEAGMHAREWIGPATATYFANELLSSQQQEIM--NLARSYVWYILPHANPDGYVYTHKTNRMWR 234
            :::.|:||||||.||...:|...:.....:|.:  .|.|...:||:|..|.|||.||.|.|||||
Mouse   174 WIDCGIHAREWISPAFCLWFIGYVTQFHGKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWR 238

  Fly   235 KTRSPQDKN-CVGTDPNRNW-DFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPMF 297
            |.||....| |||||.|||: ..||.|.||||..|||:|.|....|||||:.::.||:...:.:.
Mouse   239 KNRSAHKNNRCVGTDLNRNFASKHWCEKGASSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIK 303

  Fly   298 MFLSLHSFSQLLLYPYGHTSALPENHRQLEQIFNTAVGAMKR-RYGTRYTGGNVYDAIYPAAGSS 361
            .::|:||:||.:|:||.:..:..::|.:|..:.:.||.|::. ...||||.|:..:::|.|.|.|
Mouse   304 AYISMHSYSQQILFPYSYNRSKSKDHEELSLVASEAVRAIESINKNTRYTHGSGSESLYLAPGGS 368

  Fly   362 MDWAYGVLNVKYSFTYELRPSG-YSFWTGFRLPAAQIIPTGQETTDSLVEMI 412
            .||.|. |.:|||||.|||.:| |    ||.||...|.||..|...::.:::
Mouse   369 DDWIYD-LGIKYSFTIELRDTGRY----GFLLPERYIKPTCAEALAAISKIV 415

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.