DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4017 and Cpa5

DIOPT Version :9

Sequence 1:NP_609309.1 Gene:CG4017 / 34296 FlyBaseID:FBgn0032143 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001002808.2 Gene:Cpa5 / 408212 RGDID:1303098 Length:436 Species:Rattus norvegicus


Alignment Length:422 Identity:133/422 - (31%)
Similarity:229/422 - (54%) Gaps:28/422 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSVNILIFCLAERQRFDNYKVYRVSPVKANQLEGLRSLEANSEDALVLNNLHLGPTDFLVAPDF 71
            ||..|.::.....:..|...:|.||......||..||.||......:   :...||....:..|.
  Rat    21 LLFCNFILAVAWGQVNFTGDQVLRVLAKNEKQLSLLRDLEIQKPQKV---DFWRGPARPSLPVDM 82

  Fly    72 DGTFLKL------VKDLDLSPELIDANAQTSLSLDIEPIADA---NRRSDDYSWSEYHELNDTHR 127
            ...|.:|      :|...|:..::..:.|..|..:.:.:|.:   .|.::.:|:|.||.|.:.:.
  Rat    83 RVPFSELPSVKAYLKSHGLAYSVMIKDIQVLLDEERDAMARSRRLERSTNGFSYSSYHTLEEIYN 147

  Fly   128 WMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEAGMHAREWIGPATATYFA 192
            |:.|.|.::.::||....|:|:|.|.:|.|:.  :.|...:.:|:::.|:|:||||..||..:.:
  Rat   148 WIDNFVAEHSNLVSKIHIGKSFENRSILVLKF--STGGPNRTAIWIDTGIHSREWITHATGIWIS 210

  Fly   193 NELLSSQQQE-----IMNLARSYVWYILPHANPDGYVYTHKTNRMWRKTRSPQDK-NCVGTDPNR 251
            .:::::..::     ::|....::..:   .||||:.:||..||:|||.:|.|.. .|||.|.||
  Rat   211 QKIVNAYSKDHVLKKVLNTMDIFIEIV---TNPDGFAFTHSMNRLWRKNKSIQPGIVCVGVDLNR 272

  Fly   252 NWDFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPMFMFLSLHSFSQLLLYPYGHT 316
            ||...:...|::.:||||:|.||...|||||..:..|:........| :|:||:||:::|||||:
  Rat   273 NWRTGFGGNGSNKNPCSETYRGPAPESEPEVAAIVAFITGHGNFKAM-ISIHSYSQMVMYPYGHS 336

  Fly   317 SALPENHRQLEQIFNTAVGAMKRRYGTRYTGGNVYDAIYPAAGSSMDWAYGVLNVKYSFTYELRP 381
            .....||::|.::...||.|:.:.:|..|..|::...:|.|:|.::||||. ..:||:|::|||.
  Rat   337 LEPVPNHKELFELAKDAVKALYKVHGMEYIFGSISTTLYSASGITVDWAYD-SGIKYAFSFELRD 400

  Fly   382 SGYSFWTGFRLPAAQIIPTGQETTDSLVEMIK 413
            :|.   .||.|||:||:||.:||..:|..::|
  Rat   401 TGQ---YGFLLPASQIVPTAEETWMALRTIMK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4017NP_609309.1 Propep_M14 30..97 CDD:280416 16/72 (22%)
M14_CP_A-B_like 119..415 CDD:199844 107/301 (36%)
Cpa5NP_001002808.2 Propep_M14 48..117 CDD:396700 15/71 (21%)
M14_CPA 134..434 CDD:349442 109/306 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351682
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3014
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 1 1.000 - - mtm8990
orthoMCL 1 0.900 - - OOG6_100142
Panther 1 1.100 - - O PTHR11705
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

Return to query results.
Submit another query.