DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4017 and CG8562

DIOPT Version :9

Sequence 1:NP_609309.1 Gene:CG4017 / 34296 FlyBaseID:FBgn0032143 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_648118.1 Gene:CG8562 / 38828 FlyBaseID:FBgn0035779 Length:424 Species:Drosophila melanogaster


Alignment Length:431 Identity:156/431 - (36%)
Similarity:227/431 - (52%) Gaps:36/431 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLLLLSVNILIFCLAERQRFDNYKVYRVSPVKANQLEGLRSLEANSEDALVLNNLHLGPTDFLV 67
            ||:|.|...:    :|..|.::.|::|.|.|..|:|.:.|..|.....|.:....|...|:..:|
  Fly     7 LLVLFLGATL----VAAEQDYEGYRIYEVIPSTADQADLLHQLSLQGYDFISETRLLGHPSRVIV 67

  Fly    68 APDFDGTFLKLVKDLDLSPELIDAN---------AQTSLSLDIEPIADANRRSDDYSWSEYHELN 123
            :|.....|.:||:...::..|:::|         ||..:...:.||....|.|.:    .|:...
  Fly    68 SPAQLKHFQQLVEAEKMTLTLVNSNLGASIAEEFAQRQMQRLLAPITGKGRLSTE----RYYTHE 128

  Fly   124 DTHRWMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEAGMHAREWIGPATA 188
            :...::.:|..::|..|.|...|.|||.|.|..:.|.:.||:|.|:.||::.|.||||||.||..
  Fly   129 EIINYIDDLAQRFPSRVFVKTVGWSYEQRVLKTITITNGDGKANKKVIFMDGGFHAREWISPAAV 193

  Fly   189 TYFANELLSSQQQEIMNLARSYVWYILPHANPDGYVYTHKTN--RMWRKTRSP---QDKNCVGTD 248
            .|..::|: .|.:|..:|.:.|.|.|||..|.|||.:|....  |||||||.|   ..:.|.|.|
  Fly   194 LYVIDQLV-EQFEENAHLLKDYDWVILPLVNADGYEHTQTGTLARMWRKTRQPYTYAGQTCYGAD 257

  Fly   249 PNRNWDFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPMFMFLSLHSFSQLLLYPY 313
            ||||:||||.|.||||:||:::||||.||||||..|:...:.|:.:...|:|:|||:...||||:
  Fly   258 PNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVRDLMHSLADRGIMYLTLHSYGNYLLYPW 322

  Fly   314 GHTSALPENHRQLEQIFNTAVGAMKRRYGTRYTGGNVYDAIYPAAGSSMDWA-YGVLNVKYSFTY 377
            |.||.||||...|:.:..|...|::...||.||.|:..:.:|.|||:|.|:. |...||  |.|.
  Fly   323 GWTSDLPENWEDLDAVARTGAEAIENATGTVYTYGSSTNVLYIAAGASDDYGYYAGFNV--SITM 385

  Fly   378 ELRPSGYSFWTGFRLPAAQIIPTGQET-------TDSLVEM 411
            ||..:|.   .||..|..:|.....||       .:.::||
  Fly   386 ELPGAGS---IGFNPPVTRIDEFVTETWIGIRAMAEKVIEM 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4017NP_609309.1 Propep_M14 30..97 CDD:280416 18/75 (24%)
M14_CP_A-B_like 119..415 CDD:199844 126/306 (41%)
CG8562NP_648118.1 Propep_M14 30..99 CDD:280416 16/68 (24%)
M14_CP_A-B_like 124..420 CDD:199844 124/301 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467002
Domainoid 1 1.000 158 1.000 Domainoid score I1007
eggNOG 1 0.900 - - E1_COG2866
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1851
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 1 1.000 - - otm46992
orthoMCL 1 0.900 - - OOG6_100142
Panther 1 1.100 - - P PTHR11705
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.700

Return to query results.
Submit another query.