DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4017 and Cpa2

DIOPT Version :9

Sequence 1:NP_609309.1 Gene:CG4017 / 34296 FlyBaseID:FBgn0032143 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001013101.2 Gene:Cpa2 / 296959 RGDID:1305563 Length:417 Species:Rattus norvegicus


Alignment Length:426 Identity:161/426 - (37%)
Similarity:242/426 - (56%) Gaps:47/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLLLLLSVNILIFCLAERQRFDNYKVYRVSPVKANQLEGLRSLEANSEDALVLNNLHLGPTDF 65
            |:|.|||.::...|:|   ::.|...:|..:.|....|:..|..|||  |:.|.|        ||
  Rat     1 MRLTLLLAALLGYIYC---QETFVGDQVLEIIPSHEEQIRTLLQLEA--EEHLEL--------DF 52

  Fly    66 LVAPDFDG---------TFLKLVKDLDLSPELIDANAQTSLSLDIEPIADANR----------RS 111
            ..:|...|         ..::.|| :.|..:.||.:....   |::.:.|..|          |.
  Rat    53 WKSPTIPGETVHVRVPFASIQAVK-VFLESQGIDYSIMIE---DVQVLLDQEREEMLFNQQRERG 113

  Fly   112 DDYSWSEYHELNDTHRWMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEAG 176
            .::::..||.|.:.::.|.|||.:.|.:||....|.|:|.|.:..|:.:..   .:|.:|:|:||
  Rat   114 GNFNFEAYHTLEEIYQEMDNLVAENPGLVSKVNIGSSFENRPMNVLKFSTG---GDKPAIWLDAG 175

  Fly   177 MHAREWIGPATATYFANELLSSQQQE--IMNLARSYVWYILPHANPDGYVYTHKTNRMWRKTRSP 239
            :|||||:..|||.:.||::.|....:  |.:|..:...::||..||||||::..||||||||||.
  Rat   176 IHAREWVTQATALWTANKIASDYGTDPAITSLLNTLDIFLLPVTNPDGYVFSQTTNRMWRKTRSK 240

  Fly   240 QD-KNCVGTDPNRNWDFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPMFMFLSLH 303
            :. ..|||.|||||||.::...||||.|||:||.|||..||.||:::..|:||..: :..|::||
  Rat   241 RSGSGCVGVDPNRNWDANFGGPGASSSPCSDSYHGPKPNSEVEVKSIVDFIKSHGK-VKAFITLH 304

  Fly   304 SFSQLLLYPYGHTSALPENHRQLEQIFNTAVGAMKRRYGTRYTGGNVYDAIYPAAGSSMDWAYGV 368
            |:||||::|||:....|::..:|:::...|..|:||.:||.|..|.:...||.|:|.|:||||. 
  Rat   305 SYSQLLMFPYGYKCTKPDDFNELDEVAQKAAQALKRLHGTSYKVGPICSVIYQASGGSIDWAYD- 368

  Fly   369 LNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTGQET 404
            |.:||||.:|||.:|:   .||.|||.||:||.:||
  Rat   369 LGIKYSFAFELRDTGF---YGFLLPAKQILPTAEET 401

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4017NP_609309.1 Propep_M14 30..97 CDD:280416 18/75 (24%)
M14_CP_A-B_like 119..415 CDD:199844 130/289 (45%)
Cpa2NP_001013101.2 Propep_M14 33..100 CDD:396700 19/80 (24%)
M14_CPA 116..415 CDD:349442 130/294 (44%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 177..180 2/2 (100%)