DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4017 and ccpp-6

DIOPT Version :10

Sequence 1:NP_609309.1 Gene:CG4017 / 34296 FlyBaseID:FBgn0032143 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_495012.2 Gene:ccpp-6 / 184043 WormBaseID:WBGene00017136 Length:459 Species:Caenorhabditis elegans


Alignment Length:230 Identity:50/230 - (21%)
Similarity:82/230 - (35%) Gaps:82/230 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 WMQNLVG-KYP----------------DVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEA 175
            |:..|.. |||                |::::.....:::|               .|:.|||.|
 Worm   152 WLNELESRKYPFFHRDLLVQTVQKRRVDLITIDATPDTFQG---------------SKKMIFLTA 201

  Fly   176 GMHAREWIGPAT-ATYFANELLSSQQQEIMNLARSYVWYILPHANPDGY--------VYTHKTNR 231
            .:|..|  .|:: ..:...|.|.|:......|.:.|.:.|:|..||||.        :..|..||
 Worm   202 RVHPGE--SPSSHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDGVFLGNYRCSLMGHDLNR 264

  Fly   232 MWRKTRSPQDKNCVGTDPNRNWDFHWREVGASSDPCSESYAGPKAFSEPEVQTLSQFLKSVPEPM 296
            ||   |:|.|                             :|.|..::...:  |:|:..:.....
 Worm   265 MW---RTPSD-----------------------------WAHPSIYAVKNL--LTQYDNNPQAQT 295

  Fly   297 FMFLSLHSFSQ---LLLYPYGHTSALPE--NHRQL 326
            .:::.||:.||   ..||...:.||:.|  ..|||
 Worm   296 VIYVDLHAHSQKPNCFLYGNVNMSAVEEKSTFRQL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4017NP_609309.1 Propep_M14 29..97 CDD:460505
M14_CP_A-B_like 119..417 CDD:349433 50/230 (22%)
ccpp-6NP_495012.2 Pepdidase_M14_N 21..140 CDD:407865
M14_AGBL4_like 162..418 CDD:349479 46/220 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.