DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4017 and sdc-3

DIOPT Version :10

Sequence 1:NP_609309.1 Gene:CG4017 / 34296 FlyBaseID:FBgn0032143 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:300 Identity:58/300 - (19%)
Similarity:94/300 - (31%) Gaps:133/300 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QRFDNYKVYRVSPVKANQLEGLRSLEANSEDALVLNNLHLGP-TD-------FLVAPD------F 71
            |.|  :.|||:      |::.|.  |.|.|:.:.:...:|.. ||       :::.|:      .
 Worm   292 QEF--WDVYRL------QMQWLE--EDNIEENITMLRENLSKVTDEEFNRSVYIMRPENRASIHD 346

  Fly    72 DGTF------------LKL------VKDLDLSPELIDANAQTSLSLDIEPIADANRRSDDYSWSE 118
            |.||            |:|      ::|:....|.||.....::..::.|.........|||..|
 Worm   347 DVTFTTDAEINLKPIVLELFRNNMPLEDIRQVKECIDDMINLTVCQELIPQVATIETVRDYSGVE 411

  Fly   119 YHEL------NDTHRWMQNLVGKYPDVVSVFVAGQSYEGRELLGLRINHNDGRAEKQSIFLEAGM 177
            .|.|      |:.....|        :.:|.|..::...:|:                       
 Worm   412 QHRLKYIRPENELEIMFQ--------LATVLVKNENTHDQEI----------------------- 445

  Fly   178 HAREWIGPATATYFANELLSSQQQEIMNLARSYVWYILPHANPDGYVYTHKTNRMWRKTR----- 237
                     |:..||  ||.::|         |:|.|  ...|...:||.     ||||:     
 Worm   446 ---------TSPMFA--LLRTEQ---------YLWSI--PLRPFLRMYTD-----WRKTKLNFKK 483

  Fly   238 ----SPQ------------------DKNCVGTDPNRNWDF 255
                ||:                  ||..|.|.....:|:
 Worm   484 FRKFSPELVSKAPIDLFKVFLTTNMDKKGVATKDTDCFDY 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4017NP_609309.1 Propep_M14 29..97 CDD:460505 20/99 (20%)
M14_CP_A-B_like 119..417 CDD:349433 30/169 (18%)
sdc-3NP_506703.1 None

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