DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZSCAN22 and LOC100332458

DIOPT Version :9

Sequence 1:NP_001308045.1 Gene:ZSCAN22 / 342945 HGNCID:4929 Length:491 Species:Homo sapiens
Sequence 2:XP_002661836.5 Gene:LOC100332458 / 100332458 -ID:- Length:361 Species:Danio rerio


Alignment Length:264 Identity:105/264 - (39%)
Similarity:145/264 - (54%) Gaps:31/264 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   236 LTSQEKPPSEDKFDLVDAYGTEPPYTYSGKRSSK-------------CRECRKMFQSASALEAHQ 287
            :|:.|||                  |.:.|.||:             |..|||.|...|.|:.|.
Zfish    55 ITTDEKP------------------TLTKKTSSRGRPRKSKSMCNYSCTRCRKSFSKKSNLDIHM 101

Human   288 KTHSRKTPYACSECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPY 352
            :.|:::.||.|.:|||.|........|..:|||.:|:.|::|||:|....:...||||||||:.|
Zfish   102 RVHTKEKPYTCKQCGKRFGYIQGFENHMRIHTGERPYTCQQCGKSFYHAGNFAAHQRIHTGERKY 166

Human   353 KCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAF 417
            .|..|||:||::.:|..|.|:||||:||.|..|||:|.|:..|..|.|.|..|:.:.|..||::.
Zfish   167 TCQHCGKSFSKTGNLAVHMRIHTGEKPYSCSQCGKSFKQNVTLKIHMRTHNEERIFTCTQCGKSI 231

Human   418 SDCSALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSALMVH 482
            |....|..|:|||:|||||.|..|.|:|....||..|...||||||:.|:.|||:|:..::||.|
Zfish   232 SQKHYLDIHMRIHTGEKPYTCTECGKSFPYKGSLNHHMISHTGEKPFTCAQCGKSFTTKTSLMNH 296

Human   483 LRIH 486
            :..|
Zfish   297 MDGH 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZSCAN22NP_001308045.1 SCAN 45..133 CDD:307924
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..161
COG5048 <174..482 CDD:227381 103/258 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..249 4/12 (33%)
C2H2 Zn finger 270..290 CDD:275368 8/19 (42%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
C2H2 Zn finger 326..346 CDD:275368 8/19 (42%)
C2H2 Zn finger 354..374 CDD:275368 9/19 (47%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
C2H2 Zn finger 410..430 CDD:275368 7/19 (37%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
C2H2 Zn finger 466..486 CDD:275368 8/19 (42%)
LOC100332458XP_002661836.5 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I10838
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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