DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment und and map-1

DIOPT Version :9

Sequence 1:NP_001260299.1 Gene:und / 34294 FlyBaseID:FBgn0283478 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_500396.2 Gene:map-1 / 177128 WormBaseID:WBGene00003129 Length:371 Species:Caenorhabditis elegans


Alignment Length:399 Identity:80/399 - (20%)
Similarity:134/399 - (33%) Gaps:136/399 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SGQTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDR----FTSEEKRALDRINTDIYQ 137
            :|...|..:...:..|| :.|..:...||....:.:.::..:|    .|.|||..| ::...:.:
 Worm    66 TGSLRPGRVTDRRPVPD-HIPRPDYALHPQGVSLEERQSKSERVIKVLTDEEKEGL-KVACKLGR 128

  Fly   138 E-LRQAAEAHRQTRQYMQRYIKPGMTMIQICEELENTARRLIGENGLEAG--------LAFPTGC 193
            | |.:||:|           ..||:|    .||::    |::.|..:|..        ..||..|
 Worm   129 ECLNEAAKA-----------CGPGVT----TEEID----RVVHEAAIERDCYPSPLGYYKFPKSC 174

  Fly   194 --SLNHCAAHYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYD----KLLQAVKE 252
              |:|....|..|   |...|:..|:|.:|...:.:|...|...|....:|.|    ||::...|
 Worm   175 CTSVNEVICHGIP---DMRKLENGDLCNVDVTVYHRGFHGDLNETFLVGDKVDEESRKLVKVTFE 236

  Fly   253 ATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRI-HAGKTVP- 315
            .....|......|:..:||..||:     ....:|    ...::...||.|  :|: |....|| 
 Worm   237 CLQQAIAIVKPGVKFREIGNVIQK-----HANANG----FSVVKGYCGHGI--HRLFHTAPNVPH 290

  Fly   316 --------IVKGGESTRMEEDEFYAIETFGSTGRGLVHDDMDCSHYMKNFDLPFVPLRLQSSKQL 372
                    ::|.|.|        :.||..  ...|..|||                         
 Worm   291 YAKNNATGVMKAGNS--------FTIEPM--INAGTYHDD------------------------- 320

  Fly   373 LGTINKNFGTLAFCKRWLDRAGATKYQMALKDLCDKGIVEAYPPLCDIKGCYTAQYEHTIMLRPT 437
                           :|.|     .:....:|                 |..:||:|.|:::..|
 Worm   321 ---------------KWPD-----DWTAVTRD-----------------GRRSAQFEQTLLVTDT 348

  Fly   438 CKEVVSRGD 446
            ..|::::.|
 Worm   349 GCEILTKRD 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
undNP_001260299.1 PTZ00053 <79..448 CDD:240246 79/397 (20%)
map-1NP_500396.2 PLN03158 9..356 CDD:215607 79/396 (20%)
zf-C6H2 11..50 CDD:292429
MetAP1 118..355 CDD:238519 67/342 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.