DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and Klf5

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_445846.3 Gene:Klf5 / 84410 RGDID:621446 Length:443 Species:Rattus norvegicus


Alignment Length:79 Identity:29/79 - (36%)
Similarity:38/79 - (48%) Gaps:3/79 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 DKCGKTFKVKAQYKSHLKTRHTDYKPYKC--HLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKR 666
            |.|.|.:...:..|:||:| ||..|||||  ..|...:...:.|..|...|||.|.|.|..|.:.
  Rat   364 DGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCVVCNRS 427

  Fly   667 FTCISNLQAHRKVH 680
            |:...:|..|.|.|
  Rat   428 FSRSDHLALHMKRH 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381 25/69 (36%)
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 603..624 CDD:275368 7/19 (37%)
C2H2 Zn finger 632..652 CDD:275368 4/21 (19%)
C2H2 Zn finger 660..680 CDD:275368 6/19 (32%)
Klf5NP_445846.3 KLF5_N 3..356 CDD:410335
COG5048 345..>419 CDD:227381 21/55 (38%)
C2H2 Zn finger 361..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..413 CDD:275368 4/21 (19%)
zf-H2C2_2 405..430 CDD:404364 10/24 (42%)
zf-C2H2 419..441 CDD:395048 7/21 (33%)
C2H2 Zn finger 421..441 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BRQ6
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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