DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and si:ch211-119o8.6

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001108212.1 Gene:si:ch211-119o8.6 / 556659 ZFINID:ZDB-GENE-070912-17 Length:735 Species:Danio rerio


Alignment Length:695 Identity:153/695 - (22%)
Similarity:224/695 - (32%) Gaps:241/695 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IPKLH-CPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAKDEHGVTGAVAGQ 91
            :.|.| |..|.|:.|.......|.:.|.....|:|.:|..:|..|..|..|.:...|        
Zfish   227 LQKPHQCSTCGKSYVDRHELSMHERLHTGEKLFDCSYCKKKFVRESALKYHLRSHTG-------- 283

  Fly    92 ERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSKHRRS--- 153
             .|||.|.:||..:..:.....|.|...|        ..|.:|..|...|::|:.:..||.:   
Zfish   284 -EKPFSCSQCGKSFSRRSTLNTHLRLHMG--------PLPHQCDHCGKLFNTAAAMRAHRATHTG 339

  Fly   154 -RPDTCGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQE 217
             ||..|  |:.|           |.|                                       
Zfish   340 ERPFPC--PQCD-----------KKF--------------------------------------- 352

  Fly   218 SQNSDSGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNE 282
                                                                        ||..|
Zfish   353 ------------------------------------------------------------IFKAE 357

  Fly   283 KDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEKPPGPRKRGR 347
                |:|.|:...|.|||:....  |.|.|                              ||:..
Zfish   358 ----LEVHLDGHAGNKPFKCSVC--GKGFL------------------------------RKQEC 386

  Fly   348 PPKEKIPVVKRKYR------------------KRNAPRSPSP----DDSSGTPKRVAKISKKELK 390
            ...:.|...||.:.                  |.:.|.||..    :.|...|..:      :|.
Zfish   387 NVHQTIHQDKRSFHCTYCDNSFKRLSHLTSHLKIHYPESPHKCTYCEKSFKHPNSL------KLH 445

  Fly   391 ERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPI 455
            |||   :..||.:.|.||.|.:.......:||.                  ||:::  :.:|||.
Zfish   446 ERL---HTGEKPYSCEHCGKRFPSSGDRTRHLA------------------VHSEV--KSYKCPK 487

  Fly   456 CSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLY-CEKCDKYMT 519
            |.:.:..:..|.:|..:|  .|:..|.|. .|:..||.......|:....:|..| |.:|.:...
Zfish   488 CDRRFRFKNSLQSHQVMH--TGERPFHCK-KCDRDFARLANLKAHSVVHTEERSYSCSQCGQAFK 549

  Fly   520 GHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLST 584
            ...:||:| ...||.|      ..|.|..|||.||...:|..|.....| :.:|.|:.|||.||:
Zfish   550 CSSTLKSH-MIIHSSK------TLLDCTTCGKTFTRHDTLKRHQDIHAG-IKVYKCTDCGKCLSS 606

  Fly   585 AGILKTHMLLHKADTP-YQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTH 648
            |..||.||..|..:.. |.||:|.|:|...:..:.|.:..|:|.||:.|..|.:.:.....|:||
Zfish   607 ASCLKLHMEGHSGNKKMYYCDECEKSFSSMSYLQKHRQMAHSDEKPFVCFECGESFNSDGKLVTH 671

  Fly   649 MTVHTGIKRFLCNNCGKRFTCISNLQAHRKVHAD-------TCGQ 686
            ...|:|.....|..|||:|.....|:.|.|.|::       .||:
Zfish   672 QLQHSGRMDHACTECGKKFARKETLRRHVKAHSEERPYQCSDCGK 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/19 (26%)
C2H2 Zn finger 61..82 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..117 CDD:275368 4/18 (22%)
C2H2 Zn finger 134..152 CDD:275368 5/17 (29%)
C2H2 Zn finger 511..532 CDD:275370 5/20 (25%)
COG5048 <523..>672 CDD:227381 52/149 (35%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
C2H2 Zn finger 575..595 CDD:275368 11/19 (58%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 8/19 (42%)
si:ch211-119o8.6NP_001108212.1 RING_Ubox 9..50 CDD:473075
C2H2 Zn finger 205..225 CDD:275370
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
COG5048 257..676 CDD:227381 132/623 (21%)
C2H2 Zn finger 261..281 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..309 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
C2H2 Zn finger 345..362 CDD:275368 10/132 (8%)
C2H2 Zn finger 373..393 CDD:275368 5/51 (10%)
C2H2 Zn finger 401..421 CDD:275368 1/19 (5%)
C2H2 Zn finger 429..449 CDD:275368 6/28 (21%)
C2H2 Zn finger 457..477 CDD:275368 6/37 (16%)
C2H2 Zn finger 485..505 CDD:275368 5/19 (26%)
C2H2 Zn finger 513..533 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..561 CDD:275368 5/20 (25%)
C2H2 Zn finger 569..589 CDD:275368 8/19 (42%)
C2H2 Zn finger 597..614 CDD:275368 9/16 (56%)
C2H2 Zn finger 626..647 CDD:275368 6/20 (30%)
C2H2 Zn finger 655..675 CDD:275368 5/19 (26%)
C2H2 Zn finger 683..703 CDD:275368 8/19 (42%)
C2H2 Zn finger 711..731 CDD:275368 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.

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