DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and Zfp62

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_006246250.1 Gene:Zfp62 / 497894 RGDID:1560191 Length:924 Species:Rattus norvegicus


Alignment Length:749 Identity:189/749 - (25%)
Similarity:273/749 - (36%) Gaps:179/749 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAKDEHGVTGAVAGQERKPFV 97
            |..|.||.:|.:..:.|...|......:|..|...|.:...|.||.:...|         .||:.
  Rat   199 CDECGKAYMSYSSLINHKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTG---------EKPYE 254

  Fly    98 CEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSKHRR----SRP--- 155
            |.:||..::.....|.|.|...||        :|.||..|...||::|.|..|:|    .:|   
  Rat   255 CGECGKAFRNSSGLRVHKRIHTGE--------KPYECDICGKTFSNSSGLRVHKRIHTGEKPYEC 311

  Fly   156 DTCGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQN 220
            |.||:...    :...:..||:....|:....|       |.|.|.:...|.  ::.|:....:.
  Rat   312 DECGKAFI----TCRTLLNHKSIHFGDKPYKCD-------ECEKSFNYSSLL--IQHKVIHTGEK 363

  Fly   221 SDSGDECPDFEPNNS---------------------EDDADASGFQLPPPAMVKVEAFDEED--- 261
            ....|||.....|:|                     :..:.:||..:........:|.:.:|   
  Rat   364 PYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDICGKAFSYSSGLAVHKSIHPGKKAHECKDCGK 428

  Fly   262 -FEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEVAE 325
             |.|....:..||    |.:.|:..:.||.   |...:....|||.:                  
  Rat   429 SFSYNSLLLQHKT----IHTGERPYVCDVC---GKTFRNNSGLKVHR------------------ 468

  Fly   326 EDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGTPKRVAKISKKELK 390
                  |.|..|||           .|..|..:.|                       ||:..||
  Rat   469 ------RLHTGEKP-----------YKCDVCGKAY-----------------------ISRSSLK 493

  Fly   391 ERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLR---DDHKLNEAEMKEIFKD---VDVHAKL--D 447
            .. |.|:..||.:||.:|.|.::.....|:|.|   .:......|..:.|::   :.||.::  .
  Rat   494 NH-KGIHLGEKPYKCSYCEKSFNYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTG 557

  Fly   448 EEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLY-C 511
            |..:||..|.|.|:....|:.|..||  .|:..|||. .|...|.|......|.:....|..| |
  Rat   558 ERPYKCEECGKAYISLSSLINHKSVH--PGEKPFKCD-ECEKAFITYRTLLNHKKIHLGEKPYKC 619

  Fly   512 EKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCS 576
            :.|:|.......|..|:| .|::::|      ..||:|.|.|...:||..|.|...|..| |.|.
  Rat   620 DVCEKSFNYTSLLSQHKR-VHTREKP------FECDRCEKVFRNNSSLKVHKRIHTGEKP-YECD 676

  Fly   577 VCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPY 641
            :|||...:...|..|...|...|||.||:|||.|.......|| |..|...||:||..|.|.:.|
  Rat   677 ICGKAYISHSSLINHKSTHPGKTPYTCDECGKAFFSSRTLISH-KRVHLGEKPFKCVECGKSFSY 740

  Fly   642 RESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVH-------ADTC--------------- 684
            ...|..|..:|||.|.::|:.|||.|...|.|..|:::|       .|.|               
  Rat   741 SSLLSQHKRIHTGEKPYICDWCGKAFRNSSGLTVHKRIHTGEKPYGCDECEKAYISHSSLINHKS 805

  Fly   685 ---GQLPLN---AKATQYMGV--QRGKLLMGAKP 710
               |:.|.|   .|:..|..|  |..::..|.||
  Rat   806 VHRGKQPYNCECGKSFNYRSVLDQHKRIHTGKKP 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 6/19 (32%)
C2H2 Zn finger 61..82 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..117 CDD:275368 5/18 (28%)
C2H2 Zn finger 134..152 CDD:275368 7/17 (41%)
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 55/148 (37%)
C2H2 Zn finger 546..566 CDD:275368 9/19 (47%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 603..624 CDD:275368 9/20 (45%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 8/19 (42%)
Zfp62XP_006246250.1 COG5048 125..552 CDD:227381 94/448 (21%)
C2H2 Zn finger 143..163 CDD:275368
C2H2 Zn finger 171..191 CDD:275368
C2H2 Zn finger 199..219 CDD:275368 6/19 (32%)
C2H2 Zn finger 227..247 CDD:275368 6/19 (32%)
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
C2H2 Zn finger 311..331 CDD:275368 5/23 (22%)
C2H2 Zn finger 339..359 CDD:275368 6/28 (21%)
C2H2 Zn finger 367..387 CDD:275368 5/19 (26%)
SFP1 <389..468 CDD:227516 16/85 (19%)
C2H2 Zn finger 395..415 CDD:275368 2/19 (11%)
C2H2 Zn finger 423..443 CDD:275368 5/23 (22%)
COG5048 447..860 CDD:227381 127/467 (27%)
C2H2 Zn finger 451..471 CDD:275368 7/46 (15%)
C2H2 Zn finger 479..499 CDD:275368 7/43 (16%)
C2H2 Zn finger 507..527 CDD:275368 6/19 (32%)
C2H2 Zn finger 535..555 CDD:275368 4/19 (21%)
C2H2 Zn finger 563..583 CDD:275368 6/19 (32%)
C2H2 Zn finger 591..611 CDD:275368 5/20 (25%)
C2H2 Zn finger 619..639 CDD:275368 6/20 (30%)
C2H2 Zn finger 647..667 CDD:275368 9/19 (47%)
C2H2 Zn finger 675..695 CDD:275368 6/19 (32%)
C2H2 Zn finger 703..723 CDD:275368 9/20 (45%)
C2H2 Zn finger 731..751 CDD:275368 6/19 (32%)
C2H2 Zn finger 759..779 CDD:275368 8/19 (42%)
C2H2 Zn finger 787..807 CDD:275368 2/19 (11%)
C2H2 Zn finger 815..834 CDD:275368 4/18 (22%)
C2H2 Zn finger 842..862 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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