DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zf30C and Sry-delta

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:532 Identity:111/532 - (20%)
Similarity:175/532 - (32%) Gaps:154/532 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 CGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIP-----LASRLKTKLKQE 217
            ||..:....|||..|:                .:|.|.:...|...:.     ||:.::|:|   
  Fly     7 CGAVDLSDTGSSSSMR----------------YETLSAKVPSSQKTVSLVLTHLANCIQTQL--- 52

  Fly   218 SQNSDSGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNE 282
                       |.:|          |.:|.|....::..:|              |...::.:.:
  Fly    53 -----------DLKP----------GARLCPRCFQELSDYD--------------TIMVNLMTTQ 82

  Fly   283 KDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEV-----AEEDVL--ELRGHQMEKPP 340
            |.     |..:..|....|....|.|..||.|...:|..:|     ||.|.|  ||...|     
  Fly    83 KR-----LTTQLKGALKSEFEVPESGEDILVEEVEIPQSDVETDADAEADALFVELVKDQ----- 137

  Fly   341 GPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDS--------SGTPKRVAKISKKE---LKERLK 394
                     :|....:||::...........||.        ..:.....|.|..|   .|:|:|
  Fly   138 ---------EESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVK 193

  Fly   395 MINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKI 459
            .        :|..|.|:|:.....:||:.::                 |:|....:  ||||..|
  Fly   194 Q--------ECTTCGKVYNSWYQLQKHISEE-----------------HSKQPNHI--CPICGVI 231

  Fly   460 YLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQ-HKELLYCEKCDKYMTGHDS 523
            ...|:.|..||.:|  :||...:|. ||...|:.......|.|.. .|:...||||....:..:.
  Fly   232 RRDEEYLELHMNLH--EGKTEKQCR-YCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNL 293

  Fly   524 LKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGIL 588
            |.||.....:::.|      :||..|...|..|.:.:.|........|.:.||||.|..:....|
  Fly   294 LYNHRLRHEAEENP------IICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTL 352

  Fly   589 KTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYK----------------CHLCPK 637
            |.||..|:.|..|     |...:..|..:..::..|.|....:                |.:|..
  Fly   353 KMHMKTHEGDVVY-----GVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNT 412

  Fly   638 EYPYRESLLTHM 649
            .:..::.|..|:
  Fly   413 NFENKKELEHHL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 7/20 (35%)
COG5048 <523..>672 CDD:227381 31/143 (22%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..595 CDD:275368 9/19 (47%)
C2H2 Zn finger 603..624 CDD:275368 2/20 (10%)
C2H2 Zn finger 632..652 CDD:275368 4/18 (22%)
C2H2 Zn finger 660..680 CDD:275368
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 47/182 (26%)
C2H2 Zn finger 225..245 CDD:275368 9/19 (47%)
C2H2 Zn finger 253..273 CDD:275368 6/20 (30%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 9/21 (43%)
C2H2 Zn finger 339..359 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455464
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.